Experiment: inner cut, R2A soft agar motility assay
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Ac3H11_2226 and Ac3H11_2227 overlap by 4 nucleotides Ac3H11_2227 and Ac3H11_2228 overlap by 4 nucleotides
Ac3H11_2226 - Zinc uptake regulation protein ZUR, at 463,324 to 463,749
_2226
Ac3H11_2227 - Cell division transporter, ATP-binding protein FtsE (TC 3.A.5.1.1), at 463,746 to 464,429
_2227
Ac3H11_2228 - ABC-type antimicrobial peptide transport system, permease component, at 464,426 to 465,661
_2228
Position (kb) 463
464
465 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3 at 462.830 kb on + strand at 462.830 kb on + strand at 462.830 kb on + strand at 462.830 kb on + strand at 462.831 kb on - strand at 462.831 kb on - strand at 462.831 kb on - strand at 462.846 kb on + strand at 462.881 kb on + strand at 462.881 kb on + strand at 462.882 kb on - strand at 462.882 kb on - strand at 462.924 kb on - strand at 462.924 kb on - strand at 462.981 kb on + strand at 462.981 kb on + strand at 462.982 kb on - strand at 462.985 kb on + strand at 462.986 kb on - strand at 462.989 kb on - strand at 462.991 kb on + strand at 463.074 kb on + strand at 463.074 kb on + strand at 463.074 kb on + strand at 463.074 kb on + strand at 463.074 kb on + strand at 463.075 kb on - strand at 463.075 kb on - strand at 463.075 kb on - strand at 463.075 kb on - strand at 463.075 kb on - strand at 463.077 kb on + strand at 463.077 kb on + strand at 463.078 kb on - strand at 463.078 kb on - strand at 463.193 kb on + strand at 463.193 kb on + strand at 463.193 kb on + strand at 463.194 kb on - strand at 463.194 kb on - strand at 463.226 kb on + strand at 463.226 kb on + strand at 463.271 kb on + strand at 463.271 kb on + strand at 463.271 kb on + strand at 463.271 kb on + strand at 463.271 kb on + strand at 463.271 kb on + strand at 463.271 kb on + strand at 463.272 kb on - strand at 463.272 kb on - strand at 463.272 kb on - strand at 463.272 kb on - strand at 463.272 kb on - strand at 463.272 kb on - strand at 463.275 kb on + strand at 463.275 kb on + strand at 463.275 kb on + strand at 463.275 kb on + strand at 463.275 kb on + strand at 463.275 kb on + strand at 463.275 kb on + strand at 463.275 kb on + strand at 463.276 kb on - strand at 463.276 kb on - strand at 463.276 kb on - strand at 463.276 kb on - strand at 463.276 kb on - strand at 463.276 kb on - strand at 463.276 kb on - strand at 463.276 kb on - strand at 463.276 kb on - strand at 463.276 kb on - strand at 463.276 kb on - strand at 463.276 kb on - strand at 463.276 kb on - strand at 463.276 kb on - strand at 463.364 kb on - strand at 463.770 kb on + strand at 463.770 kb on + strand at 463.770 kb on + strand at 463.770 kb on + strand at 463.770 kb on + strand at 463.770 kb on + strand at 463.770 kb on + strand at 463.770 kb on + strand at 463.771 kb on - strand at 463.771 kb on - strand at 463.771 kb on - strand at 463.771 kb on - strand at 463.771 kb on - strand at 463.771 kb on - strand at 463.772 kb on + strand at 463.772 kb on + strand at 463.772 kb on + strand at 463.772 kb on + strand at 463.772 kb on + strand at 463.772 kb on + strand at 463.772 kb on + strand at 463.772 kb on + strand at 463.772 kb on + strand at 463.772 kb on + strand at 463.772 kb on + strand at 463.773 kb on - strand at 463.773 kb on - strand at 463.773 kb on - strand at 463.773 kb on - strand at 463.773 kb on - strand at 463.773 kb on - strand at 463.773 kb on - strand at 463.776 kb on + strand at 463.776 kb on + strand at 463.776 kb on + strand at 463.776 kb on + strand at 463.777 kb on - strand at 463.777 kb on - strand at 464.016 kb on + strand, within Ac3H11_2227 at 464.016 kb on + strand, within Ac3H11_2227 at 464.017 kb on - strand, within Ac3H11_2227 at 464.017 kb on - strand, within Ac3H11_2227 at 464.017 kb on - strand, within Ac3H11_2227 at 464.017 kb on - strand, within Ac3H11_2227 at 464.017 kb on - strand, within Ac3H11_2227 at 464.020 kb on + strand, within Ac3H11_2227 at 464.020 kb on + strand, within Ac3H11_2227 at 464.020 kb on + strand, within Ac3H11_2227 at 464.020 kb on + strand, within Ac3H11_2227 at 464.020 kb on + strand, within Ac3H11_2227 at 464.020 kb on + strand, within Ac3H11_2227 at 464.021 kb on - strand, within Ac3H11_2227 at 464.021 kb on - strand, within Ac3H11_2227 at 464.021 kb on - strand, within Ac3H11_2227 at 464.021 kb on - strand, within Ac3H11_2227 at 464.021 kb on - strand, within Ac3H11_2227 at 464.021 kb on - strand, within Ac3H11_2227 at 464.021 kb on - strand, within Ac3H11_2227 at 464.021 kb on - strand, within Ac3H11_2227 at 464.021 kb on - strand, within Ac3H11_2227 at 464.062 kb on - strand, within Ac3H11_2227 at 464.096 kb on + strand, within Ac3H11_2227 at 464.097 kb on - strand, within Ac3H11_2227 at 464.097 kb on - strand, within Ac3H11_2227 at 464.390 kb on - strand at 464.465 kb on + strand at 464.466 kb on - strand at 464.756 kb on + strand, within Ac3H11_2228 at 464.756 kb on + strand, within Ac3H11_2228 at 464.756 kb on + strand, within Ac3H11_2228 at 464.756 kb on + strand, within Ac3H11_2228 at 464.756 kb on + strand, within Ac3H11_2228 at 464.756 kb on + strand, within Ac3H11_2228 at 464.757 kb on - strand, within Ac3H11_2228 at 464.757 kb on - strand, within Ac3H11_2228 at 464.757 kb on - strand, within Ac3H11_2228 at 464.792 kb on + strand, within Ac3H11_2228 at 464.792 kb on + strand, within Ac3H11_2228 at 464.792 kb on + strand, within Ac3H11_2228 at 464.793 kb on - strand, within Ac3H11_2228 at 464.793 kb on - strand, within Ac3H11_2228 at 464.793 kb on - strand, within Ac3H11_2228 at 464.793 kb on - strand, within Ac3H11_2228 at 464.793 kb on - strand, within Ac3H11_2228 at 464.804 kb on + strand, within Ac3H11_2228 at 464.805 kb on - strand, within Ac3H11_2228 at 464.805 kb on - strand, within Ac3H11_2228 at 464.981 kb on + strand, within Ac3H11_2228
Per-strain Table
Position Strand Gene LocusTag Fraction inner cut, R2A soft agar motility assay remove 462,830 + -1.0 462,830 + +0.1 462,830 + -2.1 462,830 + -0.3 462,831 - -0.3 462,831 - -0.6 462,831 - -0.5 462,846 + +0.2 462,881 + -1.0 462,881 + -1.0 462,882 - +1.4 462,882 - -0.1 462,924 - -2.2 462,924 - -0.0 462,981 + +0.8 462,981 + -0.8 462,982 - -1.0 462,985 + +0.5 462,986 - -1.4 462,989 - -2.6 462,991 + +0.3 463,074 + +0.0 463,074 + -0.3 463,074 + -3.5 463,074 + -1.1 463,074 + -0.4 463,075 - +0.2 463,075 - -1.7 463,075 - +0.3 463,075 - +0.4 463,075 - -0.4 463,077 + -0.3 463,077 + -1.8 463,078 - +0.7 463,078 - -1.6 463,193 + -0.6 463,193 + -0.5 463,193 + +0.0 463,194 - -1.6 463,194 - +0.6 463,226 + -1.0 463,226 + -0.2 463,271 + -1.7 463,271 + -0.5 463,271 + -3.2 463,271 + +2.2 463,271 + -0.3 463,271 + +1.3 463,271 + -2.2 463,272 - +1.7 463,272 - -0.4 463,272 - +2.0 463,272 - +0.4 463,272 - +0.2 463,272 - +0.2 463,275 + +0.9 463,275 + -2.2 463,275 + +0.6 463,275 + +0.9 463,275 + +0.7 463,275 + +1.9 463,275 + +0.4 463,275 + -0.6 463,276 - +1.3 463,276 - +0.4 463,276 - +3.4 463,276 - +0.3 463,276 - +2.5 463,276 - +1.0 463,276 - +0.2 463,276 - -0.2 463,276 - +1.4 463,276 - +0.7 463,276 - -1.1 463,276 - -1.4 463,276 - -0.6 463,276 - -0.4 463,364 - +0.4 463,770 + -1.4 463,770 + -1.3 463,770 + -0.8 463,770 + +1.7 463,770 + -0.7 463,770 + +2.3 463,770 + +0.4 463,770 + +1.7 463,771 - -0.6 463,771 - -1.1 463,771 - +0.7 463,771 - +2.5 463,771 - +0.8 463,771 - -1.6 463,772 + -0.5 463,772 + +1.1 463,772 + -1.8 463,772 + +1.0 463,772 + -0.4 463,772 + +1.1 463,772 + -1.0 463,772 + +0.8 463,772 + -1.2 463,772 + +0.1 463,772 + -2.6 463,773 - -1.0 463,773 - +0.2 463,773 - +0.2 463,773 - +0.7 463,773 - +0.9 463,773 - +0.5 463,773 - -3.2 463,776 + -0.6 463,776 + +1.0 463,776 + -0.8 463,776 + +1.1 463,777 - -1.8 463,777 - -1.0 464,016 + Ac3H11_2227 0.39 -1.0 464,016 + Ac3H11_2227 0.39 -0.6 464,017 - Ac3H11_2227 0.40 +0.8 464,017 - Ac3H11_2227 0.40 -0.1 464,017 - Ac3H11_2227 0.40 -1.5 464,017 - Ac3H11_2227 0.40 -2.2 464,017 - Ac3H11_2227 0.40 +1.5 464,020 + Ac3H11_2227 0.40 +1.4 464,020 + Ac3H11_2227 0.40 +1.1 464,020 + Ac3H11_2227 0.40 -0.8 464,020 + Ac3H11_2227 0.40 -0.4 464,020 + Ac3H11_2227 0.40 -0.6 464,020 + Ac3H11_2227 0.40 +2.2 464,021 - Ac3H11_2227 0.40 +2.4 464,021 - Ac3H11_2227 0.40 -0.6 464,021 - Ac3H11_2227 0.40 +1.0 464,021 - Ac3H11_2227 0.40 -1.4 464,021 - Ac3H11_2227 0.40 +0.8 464,021 - Ac3H11_2227 0.40 -0.7 464,021 - Ac3H11_2227 0.40 +0.7 464,021 - Ac3H11_2227 0.40 -1.0 464,021 - Ac3H11_2227 0.40 +1.3 464,062 - Ac3H11_2227 0.46 -0.3 464,096 + Ac3H11_2227 0.51 +3.2 464,097 - Ac3H11_2227 0.51 +1.0 464,097 - Ac3H11_2227 0.51 -1.0 464,390 - +0.4 464,465 + -0.1 464,466 - +0.0 464,756 + Ac3H11_2228 0.27 -0.5 464,756 + Ac3H11_2228 0.27 -2.9 464,756 + Ac3H11_2228 0.27 +0.1 464,756 + Ac3H11_2228 0.27 -1.3 464,756 + Ac3H11_2228 0.27 -0.3 464,756 + Ac3H11_2228 0.27 -0.8 464,757 - Ac3H11_2228 0.27 +0.4 464,757 - Ac3H11_2228 0.27 +0.7 464,757 - Ac3H11_2228 0.27 -0.9 464,792 + Ac3H11_2228 0.30 -0.4 464,792 + Ac3H11_2228 0.30 -1.3 464,792 + Ac3H11_2228 0.30 +0.3 464,793 - Ac3H11_2228 0.30 +0.9 464,793 - Ac3H11_2228 0.30 -3.6 464,793 - Ac3H11_2228 0.30 -0.1 464,793 - Ac3H11_2228 0.30 -0.9 464,793 - Ac3H11_2228 0.30 +0.0 464,804 + Ac3H11_2228 0.31 +1.4 464,805 - Ac3H11_2228 0.31 -0.1 464,805 - Ac3H11_2228 0.31 +1.5 464,981 + Ac3H11_2228 0.45 -0.6
Or see this region's nucleotide sequence