Strain Fitness in Shewanella sp. ANA-3 around Shewana3_3931

Experiment: syringaldehyde 1 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	syringaldehyde 1 mM
4,724,282	+				-0.3
4,724,298	+				-0.2
4,724,311	-				+0.0
4,724,317	+				-0.2
4,724,325	-		Shewana3_3930	0.11	-0.3
4,724,336	+		Shewana3_3930	0.12	+0.1
4,724,392	+		Shewana3_3930	0.18	-1.7
4,724,490	-		Shewana3_3930	0.28	-0.3
4,724,490	-		Shewana3_3930	0.28	-0.5
4,724,596	-		Shewana3_3930	0.39	+0.2
4,724,743	-		Shewana3_3930	0.54	+0.4
4,724,751	+		Shewana3_3930	0.55	+0.0
4,724,766	-		Shewana3_3930	0.56	-0.4
4,724,768	-		Shewana3_3930	0.57	-0.7
4,724,860	+		Shewana3_3930	0.66	-0.7
4,724,904	-		Shewana3_3930	0.71	+0.2
4,724,927	-		Shewana3_3930	0.73	+0.3
4,724,928	-		Shewana3_3930	0.73	-1.2
4,725,135	+				-0.0
4,725,263	-				+1.5
4,725,271	+				-0.4
4,725,291	-				+0.0
4,725,520	-		Shewana3_3931	0.29	+0.2
4,725,546	-		Shewana3_3931	0.32	-0.9
4,725,692	+		Shewana3_3931	0.49	-0.1
4,725,700	-		Shewana3_3931	0.50	-0.1
4,725,856	+		Shewana3_3931	0.68	-0.2
4,725,874	-		Shewana3_3931	0.70	-0.2
4,725,893	+		Shewana3_3931	0.72	-0.2
4,726,016	-		Shewana3_3931	0.86	-0.2
4,726,098	+				-0.5
4,726,110	+				+0.3
4,726,118	-				+0.2
4,726,509	-		Shewana3_3932	0.40	-0.2
4,726,643	+		Shewana3_3932	0.55	-1.4
4,726,794	-		Shewana3_3932	0.71	+0.1
4,726,794	-		Shewana3_3932	0.71	-0.3
4,726,806	-		Shewana3_3932	0.72	+1.0
4,727,075	+				-1.5