Strain Fitness in Shewanella sp. ANA-3 around Shewana3_3859

Experiment: syringaldehyde 1 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	syringaldehyde 1 mM
4,635,213	+				-1.3
4,635,251	+				+0.5
4,635,261	+				+0.4
4,635,261	+				-0.5
4,635,273	+				+0.6
4,635,289	-				-0.4
4,635,298	+				-0.7
4,635,303	+				-0.0
4,635,321	-				-0.3
4,635,332	-				-0.1
4,635,332	-				-0.2
4,635,332	-				+0.7
4,635,359	-				+0.0
4,635,372	+				+0.2
4,635,381	+				+1.6
4,635,432	+				+0.0
4,635,524	+				+0.3
4,635,524	+				+0.2
4,635,532	-				+0.1
4,635,532	-				-0.3
4,635,615	-				-0.3
4,635,615	-				-0.4
4,635,620	-				+0.1
4,635,637	-				+0.0
4,635,640	+				+1.9
4,635,716	-		Shewana3_3858	0.15	-0.5
4,635,750	-		Shewana3_3858	0.26	+0.2
4,635,754	+		Shewana3_3858	0.28	-0.5
4,635,754	+		Shewana3_3858	0.28	-0.2
4,635,762	-		Shewana3_3858	0.30	-0.1
4,635,792	+		Shewana3_3858	0.40	+0.3
4,635,800	-		Shewana3_3858	0.43	-0.3
4,635,800	-		Shewana3_3858	0.43	+0.6
4,635,826	-		Shewana3_3858	0.51	-0.2
4,635,827	+		Shewana3_3858	0.52	+0.1
4,635,835	-		Shewana3_3858	0.54	-0.5
4,635,839	+		Shewana3_3858	0.56	-0.8
4,635,847	-		Shewana3_3858	0.58	+0.3
4,635,862	-		Shewana3_3858	0.63	+0.2
4,635,897	-		Shewana3_3858	0.75	+1.0
4,635,929	+		Shewana3_3858	0.85	+0.0
4,635,929	+		Shewana3_3858	0.85	+0.6
4,635,929	+		Shewana3_3858	0.85	-0.4
4,635,937	-		Shewana3_3858	0.88	-0.2
4,635,937	-		Shewana3_3858	0.88	+0.5
4,635,937	-		Shewana3_3858	0.88	+0.4
4,635,937	-		Shewana3_3858	0.88	+0.3
4,636,000	-				-0.3
4,636,013	+				-1.8
4,636,021	-				+0.0
4,636,083	-				+0.4
4,636,097	+				+0.1
4,636,138	-				-0.1
4,636,167	-				-0.2
4,636,370	+		Shewana3_3859	0.50	-3.0
4,636,375	+		Shewana3_3859	0.52	-1.2
4,636,422	+		Shewana3_3859	0.67	+0.0
4,636,430	-		Shewana3_3859	0.70	-0.2
4,636,430	-		Shewana3_3859	0.70	-4.7
4,636,704	-				+0.7
4,636,847	-		Shewana3_3860	0.22	+0.4
4,636,879	-		Shewana3_3860	0.28	+0.3
4,636,998	+		Shewana3_3860	0.50	-0.2
4,637,073	-		Shewana3_3860	0.64	-3.1
4,637,158	-		Shewana3_3860	0.80	-0.2
4,637,206	-		Shewana3_3860	0.89	-0.0
4,637,206	-		Shewana3_3860	0.89	-0.2
4,637,209	-		Shewana3_3860	0.89	-0.0
4,637,309	-				-0.3
4,637,447	+				-0.4
4,637,448	-				-1.4
4,637,460	+				-0.2
4,637,460	+				-1.0
4,637,460	+				-1.5