Strain Fitness in Shewanella sp. ANA-3 around Shewana3_3853

Experiment: syringaldehyde 1 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	syringaldehyde 1 mM
4,626,201	-				+0.3
4,626,203	+				+1.6
4,626,203	+				+0.6
4,626,210	+				-0.4
4,626,211	-				-0.2
4,626,211	-				-0.0
4,626,281	-				-0.2
4,626,286	+				+0.5
4,626,331	-				-0.0
4,626,391	-				-0.4
4,626,595	+				-2.0
4,626,614	-				-0.3
4,626,614	-				-0.1
4,626,616	+				+0.4
4,626,644	+		Shewana3_3852	0.11	-1.5
4,626,652	+		Shewana3_3852	0.12	+0.6
4,626,652	+		Shewana3_3852	0.12	-0.3
4,626,660	-		Shewana3_3852	0.13	-0.1
4,626,762	-		Shewana3_3852	0.30	-0.0
4,626,802	+		Shewana3_3852	0.36	+0.1
4,626,854	-		Shewana3_3852	0.45	+0.1
4,626,896	+		Shewana3_3852	0.52	-1.4
4,627,043	+		Shewana3_3852	0.76	-2.5
4,627,067	+		Shewana3_3852	0.80	-1.5
4,627,127	+		Shewana3_3852	0.90	+0.1
4,627,177	-				+0.1
4,627,189	+				-0.1
4,627,193	-				+0.0
4,627,237	+				+0.7
4,627,282	+				-0.5
4,627,282	+				-0.0
4,627,290	-				+0.1
4,627,292	+				-0.2
4,627,321	-		Shewana3_3853	0.12	+0.1
4,627,367	+		Shewana3_3853	0.17	+0.1
4,627,368	-		Shewana3_3853	0.17	+0.0
4,627,370	-		Shewana3_3853	0.17	-0.1
4,627,375	-		Shewana3_3853	0.17	+0.1
4,627,375	-		Shewana3_3853	0.17	-0.0
4,627,408	+		Shewana3_3853	0.21	-0.1
4,627,408	-		Shewana3_3853	0.21	-0.1
4,627,413	-		Shewana3_3853	0.21	-0.1
4,627,460	+		Shewana3_3853	0.26	-1.7
4,627,488	+		Shewana3_3853	0.28	+0.1
4,627,496	-		Shewana3_3853	0.29	-0.0
4,627,520	+		Shewana3_3853	0.31	+0.6
4,627,528	-		Shewana3_3853	0.32	-0.1
4,627,528	-		Shewana3_3853	0.32	+0.3
4,627,576	+		Shewana3_3853	0.37	+0.6
4,627,576	+		Shewana3_3853	0.37	+0.0
4,627,576	+		Shewana3_3853	0.37	-1.1
4,627,584	-		Shewana3_3853	0.37	-0.2
4,627,584	-		Shewana3_3853	0.37	+0.0
4,627,584	-		Shewana3_3853	0.37	+0.3
4,627,600	+		Shewana3_3853	0.39	-1.0
4,627,657	+		Shewana3_3853	0.44	-1.7
4,627,657	+		Shewana3_3853	0.44	-0.7
4,627,665	-		Shewana3_3853	0.45	-0.5
4,627,670	-		Shewana3_3853	0.46	-0.2
4,627,672	-		Shewana3_3853	0.46	-0.4
4,627,708	-		Shewana3_3853	0.49	+0.1
4,627,882	-		Shewana3_3853	0.66	-0.2
4,627,882	-		Shewana3_3853	0.66	-0.2
4,627,892	-		Shewana3_3853	0.67	-0.4
4,627,923	+		Shewana3_3853	0.70	+0.2
4,627,924	-		Shewana3_3853	0.70	+0.4
4,627,931	-		Shewana3_3853	0.70	-0.6
4,628,012	+		Shewana3_3853	0.78	-1.5
4,628,012	+		Shewana3_3853	0.78	-0.3
4,628,020	-		Shewana3_3853	0.79	-0.5
4,628,030	-		Shewana3_3853	0.80	-0.5
4,628,036	+		Shewana3_3853	0.80	-1.5
4,628,046	+		Shewana3_3853	0.81	-2.4
4,628,052	-		Shewana3_3853	0.82	-0.5
4,628,054	-		Shewana3_3853	0.82	-0.1
4,628,061	-		Shewana3_3853	0.83	-0.1
4,628,238	+				-0.6
4,628,336	-				-0.2
4,628,336	-				-0.5
4,628,361	+				+1.0
4,628,426	+				-0.1
4,628,844	+		Shewana3_3854	0.28	-0.0
4,628,849	+		Shewana3_3854	0.28	+0.5
4,628,852	-		Shewana3_3854	0.29	-0.1
4,628,893	-		Shewana3_3854	0.30	-0.6
4,628,907	-		Shewana3_3854	0.31	+0.0
4,628,907	-		Shewana3_3854	0.31	+0.4
4,629,141	+		Shewana3_3854	0.42	+0.2
4,629,149	-		Shewana3_3854	0.43	-0.3
4,629,204	-		Shewana3_3854	0.45	+0.3
4,629,229	-		Shewana3_3854	0.46	+0.0