Strain Fitness in Shewanella sp. ANA-3 around Shewana3_3838

Experiment: syringaldehyde 1 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	syringaldehyde 1 mM
4,608,430	+				+0.4
4,608,430	+				+0.4
4,608,438	-				-0.3
4,608,438	-				+0.2
4,608,438	-				+0.5
4,608,438	-				+2.3
4,608,448	-				+0.4
4,608,501	+		Shewana3_3836	0.25	+0.2
4,608,711	+		Shewana3_3837	0.22	-0.1
4,608,724	-		Shewana3_3837	0.28	+0.0
4,608,724	-		Shewana3_3837	0.28	-0.0
4,608,795	-		Shewana3_3837	0.62	+0.3
4,609,111	-				-0.1
4,609,284	+				-1.5
4,609,453	-		Shewana3_3838	0.19	-0.4
4,609,537	-		Shewana3_3838	0.32	-1.0
4,609,850	+		Shewana3_3838	0.83	-1.3
4,609,890	-				-0.3
4,610,049	-				+0.5
4,610,051	-				+0.2
4,610,068	+				+0.0
4,610,208	-		Shewana3_3839	0.13	+0.1
4,610,234	-		Shewana3_3839	0.16	-0.2
4,610,499	+		Shewana3_3839	0.42	-0.1
4,610,584	+		Shewana3_3839	0.51	-0.3
4,610,584	+		Shewana3_3839	0.51	-0.5
4,610,592	-		Shewana3_3839	0.52	+0.1
4,610,707	+		Shewana3_3839	0.63	-1.0
4,610,707	+		Shewana3_3839	0.63	-0.4
4,610,712	+		Shewana3_3839	0.64	+0.1
4,610,769	-		Shewana3_3839	0.70	+0.2
4,610,860	-		Shewana3_3839	0.79	+0.2
4,610,862	+		Shewana3_3839	0.79	+0.1