Strain Fitness in Shewanella sp. ANA-3 around Shewana3_3654

Experiment: syringaldehyde 1 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	syringaldehyde 1 mM
4,389,936	+		Shewana3_3652	0.67	+0.2
4,389,961	-		Shewana3_3652	0.71	-0.6
4,390,041	-		Shewana3_3652	0.85	-0.7
4,390,041	-		Shewana3_3652	0.85	+0.0
4,390,260	+		Shewana3_3653	0.29	-0.4
4,390,268	-		Shewana3_3653	0.31	+0.1
4,390,411	+		Shewana3_3653	0.60	+0.5
4,390,469	+		Shewana3_3653	0.72	-0.3
4,390,469	+		Shewana3_3653	0.72	-1.2
4,390,469	+		Shewana3_3653	0.72	-0.9
4,390,477	-		Shewana3_3653	0.74	-0.9
4,390,477	-		Shewana3_3653	0.74	-0.5
4,390,477	-		Shewana3_3653	0.74	-0.8
4,390,493	+		Shewana3_3653	0.77	+0.2
4,390,512	+		Shewana3_3653	0.81	+0.6
4,390,538	+		Shewana3_3653	0.86	-0.2
4,390,546	-		Shewana3_3653	0.88	-0.6
4,390,580	-				+0.6
4,390,636	-				-1.8
4,390,650	-				+0.5
4,390,758	-				+0.1
4,390,768	+				+0.3
4,390,977	-				-0.0
4,391,103	-		Shewana3_3654	0.13	+0.5
4,392,834	+				-0.1
4,392,918	+				-0.9
4,392,919	+				-0.7
4,392,919	+				+0.5
4,392,919	+				-0.1
4,392,926	-				-0.1
4,392,926	-				+0.0
4,392,935	+				-1.6
4,393,063	-				+0.1
4,393,069	-				+0.4
4,393,159	-		Shewana3_3656	0.17	+0.1
4,393,295	+		Shewana3_3656	0.44	-0.5
4,393,295	+		Shewana3_3656	0.44	-0.5
4,393,303	-		Shewana3_3656	0.46	+0.4
4,393,303	-		Shewana3_3656	0.46	-0.4
4,393,303	-		Shewana3_3656	0.46	-0.3
4,393,303	-		Shewana3_3656	0.46	-0.0
4,393,303	-		Shewana3_3656	0.46	+0.4
4,393,368	-		Shewana3_3656	0.58	+0.1
4,393,379	-		Shewana3_3656	0.61	+0.1
4,393,384	-		Shewana3_3656	0.62	+0.5
4,393,384	-		Shewana3_3656	0.62	+0.6
4,393,417	+		Shewana3_3656	0.68	-0.1
4,393,448	+		Shewana3_3656	0.74	-1.5
4,393,448	+		Shewana3_3656	0.74	-0.1
4,393,456	-		Shewana3_3656	0.76	-0.5
4,393,456	-		Shewana3_3656	0.76	+0.3
4,393,461	-		Shewana3_3656	0.77	-0.3
4,393,654	-				+0.1
4,393,667	-				-0.3
4,393,667	-				+0.1
4,393,681	+				+0.6
4,393,683	+				-0.5
4,393,689	-				-0.1
4,393,689	-				+0.5
4,393,689	-				-0.4
4,393,702	-		Shewana3_3657	0.11	+0.3
4,393,729	+		Shewana3_3657	0.16	+0.4
4,393,861	+		Shewana3_3657	0.37	+0.4
4,393,861	+		Shewana3_3657	0.37	-1.2
4,393,867	-		Shewana3_3657	0.38	+0.2
4,393,869	-		Shewana3_3657	0.38	-0.1