Strain Fitness in Shewanella sp. ANA-3 around Shewana3_3639

Experiment: syringaldehyde 1 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	syringaldehyde 1 mM
4,369,206	-		Shewana3_3638	0.27	+0.9
4,369,259	+		Shewana3_3638	0.31	+0.8
4,369,267	-		Shewana3_3638	0.32	+0.3
4,369,423	+		Shewana3_3638	0.44	-0.1
4,369,423	+		Shewana3_3638	0.44	-0.1
4,369,464	-		Shewana3_3638	0.47	+0.2
4,369,487	-		Shewana3_3638	0.49	-0.3
4,369,534	+		Shewana3_3638	0.53	-0.9
4,369,624	-		Shewana3_3638	0.60	-0.1
4,369,780	+		Shewana3_3638	0.72	-0.2
4,369,788	-		Shewana3_3638	0.72	-1.1
4,369,788	-		Shewana3_3638	0.72	-0.1
4,369,788	-		Shewana3_3638	0.72	+0.8
4,369,793	-		Shewana3_3638	0.73	+0.4
4,369,813	+		Shewana3_3638	0.74	-0.7
4,370,110	-				+0.4
4,370,110	-				-0.0
4,370,168	-				+0.4
4,370,168	-				+0.0
4,370,168	-				+0.1
4,370,208	+				+0.0
4,370,224	-				+0.4
4,370,232	-				-0.2
4,370,385	+		Shewana3_3639	0.24	+0.9
4,370,463	-		Shewana3_3639	0.32	-0.0
4,370,650	-		Shewana3_3639	0.51	+0.4
4,370,962	-		Shewana3_3639	0.83	+0.6
4,371,087	-				-0.0
4,371,089	+				-0.3
4,371,221	-				+0.3
4,371,221	-				-0.0
4,371,481	+		Shewana3_3640	0.25	-1.1
4,371,623	-		Shewana3_3640	0.34	-1.4
4,371,849	+		Shewana3_3640	0.50	-1.0
4,371,963	-		Shewana3_3640	0.58	+0.8