Strain Fitness in Shewanella sp. ANA-3 around Shewana3_3576

Experiment: syringaldehyde 1 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	syringaldehyde 1 mM
4,288,407	+		Shewana3_3574	0.41	-0.1
4,288,436	-		Shewana3_3574	0.46	-1.5
4,288,472	+		Shewana3_3574	0.52	-0.6
4,288,607	-		Shewana3_3574	0.73	-0.1
4,288,621	-		Shewana3_3574	0.76	-1.7
4,288,626	-		Shewana3_3574	0.76	-0.7
4,288,658	+		Shewana3_3574	0.82	+0.1
4,288,677	-		Shewana3_3574	0.85	-0.9
4,288,767	-				+0.2
4,288,854	+				+0.4
4,288,862	-				-0.0
4,288,935	-				-0.4
4,288,985	+				+0.1
4,289,001	+				-0.0
4,289,008	+				-0.5
4,289,034	+		Shewana3_3575	0.12	-0.0
4,289,034	+		Shewana3_3575	0.12	-0.4
4,289,121	+		Shewana3_3575	0.39	+0.3
4,289,129	-		Shewana3_3575	0.41	+0.1
4,289,129	-		Shewana3_3575	0.41	+1.4
4,289,129	-		Shewana3_3575	0.41	+1.2
4,289,200	+		Shewana3_3575	0.63	+0.0
4,289,208	-		Shewana3_3575	0.66	-0.7
4,289,331	+				-1.6
4,289,438	+				-2.1
4,289,496	-				-1.5
4,289,626	-	dipZ	Shewana3_3576	0.17	-0.7
4,289,865	+	dipZ	Shewana3_3576	0.30	-1.3
4,289,891	-	dipZ	Shewana3_3576	0.31	-1.4
4,290,041	+	dipZ	Shewana3_3576	0.39	-2.1
4,290,065	+	dipZ	Shewana3_3576	0.41	-2.3
4,290,070	+	dipZ	Shewana3_3576	0.41	-1.9
4,290,077	+	dipZ	Shewana3_3576	0.41	-2.8
4,290,224	-	dipZ	Shewana3_3576	0.49	-2.5
4,290,331	+	dipZ	Shewana3_3576	0.55	-2.2
4,290,331	+	dipZ	Shewana3_3576	0.55	-2.9
4,290,339	-	dipZ	Shewana3_3576	0.56	+0.0
4,290,429	-	dipZ	Shewana3_3576	0.60	+0.4
4,290,429	-	dipZ	Shewana3_3576	0.60	-2.0
4,290,429	-	dipZ	Shewana3_3576	0.60	-1.6
4,290,580	-	dipZ	Shewana3_3576	0.69	-0.6
4,290,698	+	dipZ	Shewana3_3576	0.75	-1.0
4,290,798	+	dipZ	Shewana3_3576	0.81	-3.4
4,290,798	+	dipZ	Shewana3_3576	0.81	-1.2
4,290,806	-	dipZ	Shewana3_3576	0.81	-1.1
4,290,806	-	dipZ	Shewana3_3576	0.81	-1.4
4,290,806	-	dipZ	Shewana3_3576	0.81	-2.7
4,290,808	+	dipZ	Shewana3_3576	0.81	-1.7
4,290,859	+	dipZ	Shewana3_3576	0.84	-1.7
4,291,002	-				-0.8
4,291,042	-				-1.9
4,291,111	-				-2.2
4,291,361	+				-0.1
4,291,369	-				-0.0
4,291,369	-				-0.1
4,291,374	-				-0.1
4,291,472	-				-0.5
4,291,483	-		Shewana3_3577	0.11	+0.4
4,291,615	-		Shewana3_3577	0.19	+0.3
4,291,621	-		Shewana3_3577	0.19	+0.2
4,291,630	+		Shewana3_3577	0.20	+0.0
4,291,648	-		Shewana3_3577	0.21	+1.0
4,291,816	-		Shewana3_3577	0.31	+0.0
4,291,829	-		Shewana3_3577	0.32	-0.1
4,291,897	+		Shewana3_3577	0.36	-0.1
4,291,911	-		Shewana3_3577	0.37	-0.7
4,292,000	-		Shewana3_3577	0.42	-0.4