Strain Fitness in Shewanella sp. ANA-3 around Shewana3_3393

Experiment: syringaldehyde 1 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	syringaldehyde 1 mM
4,061,720	-				+0.0
4,061,720	-				+0.1
4,061,720	-				-0.1
4,061,769	+				+0.1
4,061,785	+				-0.4
4,061,785	+				-0.2
4,061,934	-		Shewana3_3392	0.78	-0.5
4,062,006	-				-0.2
4,062,139	+				+0.3
4,062,208	+				-0.3
4,062,216	-				-0.3
4,062,316	-				-0.7
4,062,329	+				-1.3
4,062,387	+				-2.7
4,062,395	-				-1.1
4,062,395	-				-1.8
4,062,411	-				-1.9
4,062,503	+				-1.1
4,062,523	-				-1.9
4,062,741	-		Shewana3_3393	0.20	-1.6
4,062,768	+		Shewana3_3393	0.21	-1.4
4,062,797	-		Shewana3_3393	0.23	-2.3
4,062,855	+		Shewana3_3393	0.26	-1.8
4,062,938	+		Shewana3_3393	0.30	+0.4
4,063,229	+		Shewana3_3393	0.45	-1.5
4,063,278	+		Shewana3_3393	0.48	-0.8
4,063,320	+		Shewana3_3393	0.50	-2.8
4,063,325	+		Shewana3_3393	0.50	-1.9
4,063,359	+		Shewana3_3393	0.52	-3.2
4,063,406	-		Shewana3_3393	0.54	-1.1
4,063,698	+		Shewana3_3393	0.70	-2.2
4,063,886	-		Shewana3_3393	0.79	-1.4
4,064,169	+				-1.9
4,064,224	+				-1.3
4,064,232	-				-3.1
4,064,456	-		Shewana3_3394	0.31	-1.4
4,064,556	+		Shewana3_3394	0.52	-0.3
4,064,561	+		Shewana3_3394	0.53	+2.0
4,064,619	+		Shewana3_3394	0.66	-0.4
4,064,815	-				-0.6
4,065,183	+				-0.1
4,065,221	-				-0.1