Strain Fitness in Shewanella sp. ANA-3 around Shewana3_3073
Experiment: syringaldehyde 1 mM
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | syringaldehyde 1 mM |
---|---|---|---|---|---|
remove | |||||
3,684,557 | + | -0.7 | |||
3,684,732 | + | Shewana3_3072 | 0.48 | +0.4 | |
3,685,280 | - | +1.4 | |||
3,685,501 | - | Shewana3_3073 | 0.15 | -1.8 | |
3,686,223 | + | Shewana3_3073 | 0.70 | -1.0 | |
3,686,347 | + | Shewana3_3073 | 0.79 | -0.5 | |
3,686,387 | + | Shewana3_3073 | 0.83 | -1.6 | |
3,686,395 | - | Shewana3_3073 | 0.83 | +1.4 | |
3,686,395 | - | Shewana3_3073 | 0.83 | +1.4 | |
3,687,099 | - | Shewana3_3074 | 0.38 | -0.0 | |
3,687,187 | - | Shewana3_3074 | 0.46 | +0.1 | |
3,687,316 | + | Shewana3_3074 | 0.58 | -1.2 | |
3,687,612 | - | Shewana3_3074 | 0.85 | -0.4 |
Or see this region's nucleotide sequence