Strain Fitness in Shewanella sp. ANA-3 around Shewana3_3028
Experiment: syringaldehyde 1 mM
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | syringaldehyde 1 mM |
---|---|---|---|---|---|
remove | |||||
3,633,342 | - | +0.5 | |||
3,633,496 | - | Shewana3_3028 | 0.16 | -0.5 | |
3,634,001 | - | Shewana3_3028 | 0.44 | -0.4 | |
3,634,001 | - | Shewana3_3028 | 0.44 | -0.9 | |
3,634,056 | - | Shewana3_3028 | 0.47 | -1.0 | |
3,634,533 | - | Shewana3_3028 | 0.74 | -2.2 | |
3,634,638 | - | Shewana3_3028 | 0.80 | +0.6 | |
3,635,910 | - | Shewana3_3030 | 0.28 | -0.2 |
Or see this region's nucleotide sequence