Strain Fitness in Shewanella sp. ANA-3 around Shewana3_2726

Experiment: syringaldehyde 1 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	syringaldehyde 1 mM
3,256,298	-				+1.4
3,256,327	+				-0.2
3,256,444	+				+0.4
3,256,618	-		Shewana3_2725	0.27	-2.7
3,256,634	+		Shewana3_2725	0.29	-0.7
3,256,653	+		Shewana3_2725	0.32	-0.2
3,256,731	+		Shewana3_2725	0.43	+0.5
3,256,739	-		Shewana3_2725	0.44	+0.4
3,256,765	-		Shewana3_2725	0.48	+1.4
3,256,825	+		Shewana3_2725	0.56	+0.3
3,256,911	+		Shewana3_2725	0.68	-0.6
3,256,929	-		Shewana3_2725	0.70	-3.7
3,256,982	+		Shewana3_2725	0.77	-0.2
3,256,982	+		Shewana3_2725	0.77	-0.7
3,256,982	+		Shewana3_2725	0.77	+0.5
3,256,990	-		Shewana3_2725	0.79	-0.2
3,256,990	-		Shewana3_2725	0.79	+0.4
3,257,046	+		Shewana3_2725	0.86	-2.3
3,257,110	+				+0.2
3,257,152	+				+0.4
3,257,152	+				+2.4
3,257,204	+				+1.1
3,257,204	+				-0.6
3,257,204	+				+1.0
3,257,205	+				-1.2
3,257,212	-				-0.6
3,257,240	+				-0.2
3,257,240	+				-1.2
3,257,248	-				-1.0
3,257,248	-				-0.2
3,257,248	-				+0.1
3,257,266	+				-0.2
3,257,268	+				-0.2
3,257,273	+				-0.2
3,257,273	+				+1.4
3,257,275	+				-1.1
3,257,284	-				-1.6
3,257,284	-				-0.2
3,257,284	-				+1.4
3,257,289	-				-1.3
3,257,295	+				-0.2
3,257,303	-				+1.0
3,257,407	+				+0.2
3,257,414	-				-1.4
3,257,420	-				+1.4
3,257,422	+				-1.0
3,257,422	+				-0.6
3,257,427	-		Shewana3_2726	0.10	-0.6
3,257,430	-		Shewana3_2726	0.10	+0.4
3,257,430	-		Shewana3_2726	0.10	-1.0
3,257,437	-		Shewana3_2726	0.11	+1.4
3,257,478	+		Shewana3_2726	0.14	-0.3
3,257,486	-		Shewana3_2726	0.14	-0.6
3,257,498	-		Shewana3_2726	0.15	-0.8
3,257,499	-		Shewana3_2726	0.15	-0.2
3,257,521	+		Shewana3_2726	0.17	-2.0
3,257,526	+		Shewana3_2726	0.17	+1.4
3,257,528	+		Shewana3_2726	0.17	-1.6
3,257,534	-		Shewana3_2726	0.18	+0.4
3,257,536	-		Shewana3_2726	0.18	+1.4
3,257,623	+		Shewana3_2726	0.24	-0.2
3,257,639	-		Shewana3_2726	0.25	-0.2
3,257,712	-		Shewana3_2726	0.31	+1.4
3,257,739	+		Shewana3_2726	0.33	+0.1
3,257,740	+		Shewana3_2726	0.33	-0.1
3,257,741	-		Shewana3_2726	0.33	+1.4
3,257,756	+		Shewana3_2726	0.34	+0.3
3,257,782	+		Shewana3_2726	0.36	-1.4
3,257,790	-		Shewana3_2726	0.36	+1.4
3,257,790	-		Shewana3_2726	0.36	-0.6
3,257,888	+		Shewana3_2726	0.43	-1.2
3,257,895	+		Shewana3_2726	0.44	-0.3
3,257,909	-		Shewana3_2726	0.45	+0.4
3,257,930	+		Shewana3_2726	0.46	+0.6
3,257,984	+		Shewana3_2726	0.50	+1.4
3,257,996	+		Shewana3_2726	0.51	+1.4
3,258,014	-		Shewana3_2726	0.52	-1.4
3,258,014	-		Shewana3_2726	0.52	-0.6
3,258,021	-		Shewana3_2726	0.53	+0.4
3,258,047	+		Shewana3_2726	0.55	-1.0
3,258,072	-		Shewana3_2726	0.57	+0.4
3,258,082	+		Shewana3_2726	0.57	-2.2
3,258,176	+		Shewana3_2726	0.64	-0.6
3,258,177	+		Shewana3_2726	0.64	-2.8
3,258,178	+		Shewana3_2726	0.64	-1.7
3,258,178	+		Shewana3_2726	0.64	-0.6
3,258,178	+		Shewana3_2726	0.64	+1.4
3,258,178	+		Shewana3_2726	0.64	-0.6
3,258,178	+		Shewana3_2726	0.64	-1.8
3,258,178	+		Shewana3_2726	0.64	+0.6
3,258,178	+		Shewana3_2726	0.64	-0.2
3,258,178	+		Shewana3_2726	0.64	-1.3
3,258,178	+		Shewana3_2726	0.64	-2.2
3,258,178	+		Shewana3_2726	0.64	-1.4
3,258,178	+		Shewana3_2726	0.64	-0.2
3,258,186	-		Shewana3_2726	0.65	-0.2
3,258,186	-		Shewana3_2726	0.65	-0.6
3,258,186	-		Shewana3_2726	0.65	-1.4
3,258,186	-		Shewana3_2726	0.65	-0.2
3,258,186	-		Shewana3_2726	0.65	-0.6
3,258,186	-				+1.4
3,258,186	-		Shewana3_2726	0.65	+0.1
3,258,211	+		Shewana3_2726	0.67	-0.7
3,258,243	+		Shewana3_2726	0.69	-0.9
3,258,287	+		Shewana3_2726	0.72	+0.2
3,258,333	-		Shewana3_2726	0.75	+0.4
3,258,346	+		Shewana3_2726	0.76	-1.8
3,258,354	-		Shewana3_2726	0.77	+1.4
3,258,354	-		Shewana3_2726	0.77	-1.2
3,258,375	+		Shewana3_2726	0.78	-0.2
3,258,399	-		Shewana3_2726	0.80	-0.2
3,258,415	-		Shewana3_2726	0.81	+0.2
3,258,437	+		Shewana3_2726	0.83	+1.4
3,258,512	-		Shewana3_2726	0.88	-0.2
3,258,521	+		Shewana3_2726	0.89	+1.4
3,258,536	-		Shewana3_2726	0.90	+0.4
3,258,556	-				-1.0
3,258,593	+				+0.4
3,258,620	+				-1.6
3,258,621	+				-1.4
3,258,630	+				+0.3
3,258,630	+				+1.4
3,258,638	-				-1.0
3,258,638	-				-0.0
3,258,640	+				-0.3
3,258,640	+				+1.4
3,258,640	+				-0.1
3,258,647	+				-0.3
3,258,647	+				+0.5
3,258,653	-				-0.4
3,258,655	-				-0.6
3,258,667	+				+0.4
3,258,676	-				-1.2
3,258,678	+				-0.7
3,258,755	+		Shewana3_2727	0.13	-0.8
3,258,851	+		Shewana3_2727	0.41	-1.6
3,258,875	-		Shewana3_2727	0.48	+1.4
3,258,908	+		Shewana3_2727	0.58	+0.8
3,258,962	-		Shewana3_2727	0.73	-0.5
3,258,985	-		Shewana3_2727	0.80	-1.4
3,259,016	-		Shewana3_2727	0.89	-0.2
3,259,047	+				-0.6
3,259,047	+				-0.0
3,259,047	+				-0.6
3,259,133	+				+0.2
3,259,133	+				-0.2
3,259,150	+				-0.4
3,259,190	+		Shewana3_2728	0.10	+0.4
3,259,190	+		Shewana3_2728	0.10	-1.0
3,259,190	+		Shewana3_2728	0.10	-0.0
3,259,200	+		Shewana3_2728	0.13	-1.0
3,259,219	-		Shewana3_2728	0.17	+1.4
3,259,219	-		Shewana3_2728	0.17	+0.6
3,259,247	+		Shewana3_2728	0.23	+0.9
3,259,247	+		Shewana3_2728	0.23	-0.0
3,259,255	-		Shewana3_2728	0.25	-0.2
3,259,275	-		Shewana3_2728	0.29	-1.0
3,259,275	-		Shewana3_2728	0.29	+1.4
3,259,391	+		Shewana3_2728	0.55	+1.4
3,259,405	+		Shewana3_2728	0.58	-1.4
3,259,412	-		Shewana3_2728	0.60	-1.0
3,259,428	-		Shewana3_2728	0.63	-0.2
3,259,448	+		Shewana3_2728	0.68	+0.5
3,259,456	-		Shewana3_2728	0.70	-0.2
3,259,460	+		Shewana3_2728	0.70	-0.6
3,259,460	+		Shewana3_2728	0.70	+0.1
3,259,468	-		Shewana3_2728	0.72	+0.4
3,259,579	+				-0.4
3,259,579	+				+0.2
3,259,619	-				-0.6
3,259,644	+				+0.4