Strain Fitness in Shewanella sp. ANA-3 around Shewana3_2594
Experiment: syringaldehyde 1 mM
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | syringaldehyde 1 mM |
---|---|---|---|---|---|
remove | |||||
3,097,724 | - | Shewana3_2593 | 0.74 | -1.0 | |
3,098,072 | + | +0.5 | |||
3,098,403 | - | Shewana3_2594 | 0.35 | -1.6 | |
3,099,074 | - | -0.2 | |||
3,099,376 | - | Shewana3_2595 | 0.22 | +1.4 | |
3,099,388 | + | Shewana3_2595 | 0.23 | +0.8 | |
3,099,487 | - | Shewana3_2595 | 0.30 | -0.6 | |
3,099,520 | + | Shewana3_2595 | 0.32 | +0.8 | |
3,099,648 | + | Shewana3_2595 | 0.41 | +1.4 | |
3,099,687 | - | Shewana3_2595 | 0.43 | +0.4 | |
3,099,746 | + | Shewana3_2595 | 0.47 | +0.6 | |
3,099,759 | - | Shewana3_2595 | 0.48 | +0.4 |
Or see this region's nucleotide sequence