Strain Fitness in Shewanella sp. ANA-3 around Shewana3_2535
Experiment: syringaldehyde 1 mM
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | syringaldehyde 1 mM |
---|---|---|---|---|---|
remove | |||||
3,031,033 | - | -0.2 | |||
3,031,056 | - | Shewana3_2535 | 0.13 | -1.7 | |
3,031,056 | - | Shewana3_2535 | 0.13 | +0.6 | |
3,031,078 | - | Shewana3_2535 | 0.18 | -0.7 | |
3,031,291 | - | Shewana3_2535 | 0.71 | -0.2 | |
3,031,306 | + | Shewana3_2535 | 0.75 | -0.6 | |
3,031,360 | - | Shewana3_2535 | 0.88 | +0.2 | |
3,031,378 | - | -1.0 | |||
3,031,644 | - | +0.6 | |||
3,031,689 | + | -1.8 | |||
3,031,895 | + | Shewana3_2536 | 0.15 | -0.2 | |
3,031,995 | - | Shewana3_2536 | 0.19 | +0.0 | |
3,032,028 | + | Shewana3_2536 | 0.21 | -0.8 | |
3,032,053 | + | Shewana3_2536 | 0.22 | -2.0 | |
3,032,302 | - | Shewana3_2536 | 0.33 | -0.7 |
Or see this region's nucleotide sequence