Strain Fitness in Shewanella sp. ANA-3 around Shewana3_2474
Experiment: syringaldehyde 1 mM
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
| Position | Strand | Gene | LocusTag | Fraction | syringaldehyde 1 mM |
|---|---|---|---|---|---|
| remove | |||||
| 2,960,210 | + | Shewana3_2473 | 0.47 | -0.6 | |
| 2,960,250 | - | Shewana3_2473 | 0.53 | +1.1 | |
| 2,960,611 | + | -1.1 | |||
| 2,961,009 | + | Shewana3_2474 | 0.47 | +0.6 | |
| 2,961,053 | + | Shewana3_2474 | 0.64 | +0.9 | |
| 2,961,504 | - | -0.2 | |||
| 2,961,598 | + | Shewana3_2475 | 0.13 | -0.6 | |
| 2,961,620 | - | Shewana3_2475 | 0.14 | +0.5 | |
| 2,961,630 | - | Shewana3_2475 | 0.14 | +0.5 | |
| 2,961,923 | + | Shewana3_2475 | 0.31 | -0.2 | |
| 2,962,027 | - | Shewana3_2475 | 0.38 | -0.1 | |
| 2,962,059 | - | Shewana3_2475 | 0.39 | -0.2 | |
| 2,962,120 | - | Shewana3_2475 | 0.43 | +0.4 |
Or see this region's nucleotide sequence