Strain Fitness in Shewanella sp. ANA-3 around Shewana3_R0102

Experiment: syringaldehyde 1 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	syringaldehyde 1 mM
2,918,198	+		Shewana3_2434	0.56	+1.4
2,918,289	+		Shewana3_2434	0.69	+1.4
2,918,343	+				+1.4
2,918,345	+		Shewana3_2434	0.76	+0.4
2,918,345	+				+1.4
2,918,351	-		Shewana3_2434	0.77	-0.6
2,918,353	-		Shewana3_2434	0.77	+0.4
2,918,390	-		Shewana3_2434	0.82	-0.2
2,918,459	-				-1.2
2,918,459	-				+1.4
2,918,608	+				-0.2
2,918,628	+				+0.4
2,918,636	-				-0.2
2,918,649	-				+1.4
2,918,688	-				+0.1
2,918,819	+				+0.9
2,918,827	-				+0.0
2,918,827	-				+0.4
2,919,094	-		Shewana3_R0102	0.61	+1.6
2,919,094	-		Shewana3_R0102	0.61	+0.7
2,919,094	-		Shewana3_R0102	0.61	+1.4
2,919,094	-		Shewana3_R0102	0.61	+0.8
2,919,096	-		Shewana3_R0102	0.64	+0.5
2,919,104	-		Shewana3_R0102	0.74	+0.2
2,919,244	-				-0.2
2,919,318	+				+1.2
2,919,326	-				-1.4
2,919,344	+				+0.4
2,919,444	-				-1.8
2,919,497	+				+0.4
2,919,604	-				-2.0
2,919,606	+				+0.1
2,919,675	-				-0.2
2,920,042	-		Shewana3_2435	0.26	-0.3
2,920,048	+		Shewana3_2435	0.26	+0.2
2,920,048	-		Shewana3_2435	0.26	+1.0
2,920,096	-		Shewana3_2435	0.28	+2.1
2,920,111	-				+1.4