Strain Fitness in Shewanella sp. ANA-3 around Shewana3_2434

Experiment: syringaldehyde 1 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	syringaldehyde 1 mM
2,916,783	+		Shewana3_2433	0.76	-0.2
2,916,783	+		Shewana3_2433	0.76	+0.8
2,916,783	+		Shewana3_2433	0.76	+0.8
2,916,783	+		Shewana3_2433	0.76	+0.4
2,916,786	-		Shewana3_2433	0.76	+0.4
2,916,788	+		Shewana3_2433	0.76	-0.4
2,916,794	-		Shewana3_2433	0.77	+0.4
2,916,801	+		Shewana3_2433	0.78	-0.8
2,916,809	-		Shewana3_2433	0.79	+0.4
2,916,809	-		Shewana3_2433	0.79	+1.4
2,916,814	+		Shewana3_2433	0.80	+0.8
2,916,814	+		Shewana3_2433	0.80	+2.1
2,916,814	+		Shewana3_2433	0.80	+0.8
2,916,852	+		Shewana3_2433	0.85	-0.6
2,916,907	+				+0.3
2,916,937	+				+0.8
2,916,964	+				+0.1
2,917,019	+				-0.1
2,917,033	+				+0.1
2,917,033	+				+1.4
2,917,033	+				+0.2
2,917,033	+				-0.8
2,917,033	+				+1.1
2,917,033	+				-0.8
2,917,033	+				-0.2
2,917,041	-				+0.4
2,917,041	-				+0.6
2,917,041	-				-1.4
2,917,041	-				+0.4
2,917,053	-				+0.4
2,917,054	+				-0.2
2,917,062	-				-0.2
2,917,067	+				-0.8
2,917,075	-				+0.4
2,917,089	-				-0.2
2,917,113	+				-0.4
2,917,114	+				-0.1
2,917,114	+				+0.5
2,917,122	-				+0.8
2,917,122	-				+0.4
2,917,168	+				-0.4
2,917,216	+				-0.2
2,917,222	-				-0.6
2,917,224	-				-0.2
2,917,241	+				+2.9
2,917,241	+				+0.4
2,917,241	+				-1.2
2,917,241	+				+1.4
2,917,241	+				+1.7
2,917,241	+				-0.6
2,917,241	+				+0.4
2,917,241	+				+0.4
2,917,241	+				-1.2
2,917,241	+				+0.4
2,917,241	+				-0.6
2,917,241	+				-0.2
2,917,241	+				+1.4
2,917,241	+				+0.4
2,917,241	+				-2.0
2,917,241	+				-0.6
2,917,249	-				-1.2
2,917,249	-				+0.4
2,917,249	-				+0.4
2,917,249	-				+1.4
2,917,249	-				+0.4
2,917,249	-				+0.4
2,917,249	-				-0.2
2,917,249	-				+0.0
2,917,249	-				-0.2
2,917,251	+				+1.4
2,917,256	-				+1.4
2,917,271	-				-1.4
2,917,271	-				-1.2
2,917,309	+				-0.6
2,917,338	-				+1.4
2,917,347	-				-2.5
2,917,351	+				-0.6
2,917,351	-				-0.2
2,917,351	-				-0.2
2,917,351	-				-0.2
2,917,359	-				-0.2
2,917,364	-				+0.4
2,917,386	+				+1.0
2,917,407	+				+1.4
2,917,412	+				+1.4
2,917,412	+				-1.0
2,917,412	+				-1.0
2,917,415	-				-0.4
2,917,415	-				-0.7
2,917,415	-				-0.1
2,917,428	-				-0.6
2,917,498	+				+1.4
2,917,566	-				+0.9
2,917,626	+				-2.1
2,917,636	+				-0.6
2,917,636	+				+0.9
2,917,636	+				-0.6
2,917,644	-				+1.4
2,917,644	-				-0.2
2,917,644	-				+1.4
2,917,644	-				+1.4
2,917,644	-				+1.4
2,917,644	-				+0.4
2,917,650	-				-1.0
2,917,658	+				-1.2
2,917,658	+				+1.4
2,917,658	+				+1.4
2,917,694	-				+0.4
2,917,695	+				+0.4
2,917,707	+				+1.4
2,917,729	+				-1.2
2,917,729	+				-0.5
2,917,741	+				+1.4
2,917,749	-				+0.4
2,917,872	+		Shewana3_2434	0.12	-0.9
2,917,902	+		Shewana3_2434	0.17	+0.0
2,917,902	+		Shewana3_2434	0.17	+0.4
2,917,987	+		Shewana3_2434	0.28	+1.4
2,918,198	+		Shewana3_2434	0.56	+1.4
2,918,289	+		Shewana3_2434	0.69	+1.4
2,918,343	+				+1.4
2,918,345	+		Shewana3_2434	0.76	+0.4
2,918,345	+				+1.4
2,918,351	-		Shewana3_2434	0.77	-0.6
2,918,353	-		Shewana3_2434	0.77	+0.4
2,918,390	-		Shewana3_2434	0.82	-0.2
2,918,459	-				-1.2
2,918,459	-				+1.4
2,918,608	+				-0.2
2,918,628	+				+0.4
2,918,636	-				-0.2
2,918,649	-				+1.4
2,918,688	-				+0.1
2,918,819	+				+0.9
2,918,827	-				+0.0
2,918,827	-				+0.4
2,919,094	-		Shewana3_R0102	0.61	+1.6
2,919,094	-		Shewana3_R0102	0.61	+0.7
2,919,094	-		Shewana3_R0102	0.61	+1.4
2,919,094	-		Shewana3_R0102	0.61	+0.8
2,919,096	-		Shewana3_R0102	0.64	+0.5
2,919,104	-		Shewana3_R0102	0.74	+0.2
2,919,244	-				-0.2
2,919,318	+				+1.2
2,919,326	-				-1.4
2,919,344	+				+0.4
2,919,444	-				-1.8
2,919,497	+				+0.4