Strain Fitness in Shewanella sp. ANA-3 around Shewana3_2292
Experiment: syringaldehyde 1 mM
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | syringaldehyde 1 mM |
---|---|---|---|---|---|
remove | |||||
2,755,613 | + | Shewana3_2291 | 0.19 | +1.4 | |
2,755,641 | - | Shewana3_2291 | 0.30 | +0.1 | |
2,756,335 | + | +1.4 | |||
2,756,581 | - | Shewana3_2292 | 0.28 | -1.1 | |
2,756,713 | - | Shewana3_2292 | 0.53 | -1.2 | |
2,756,748 | + | Shewana3_2292 | 0.59 | -1.4 | |
2,756,756 | - | Shewana3_2292 | 0.61 | +1.4 | |
2,756,841 | + | Shewana3_2292 | 0.76 | +0.4 | |
2,756,862 | + | Shewana3_2292 | 0.80 | +0.1 | |
2,757,007 | + | +1.4 | |||
2,757,364 | - | Shewana3_2293 | 0.31 | +0.9 | |
2,757,428 | - | Shewana3_2293 | 0.37 | -1.3 | |
2,757,577 | - | Shewana3_2293 | 0.51 | +0.4 | |
2,757,625 | + | Shewana3_2293 | 0.56 | +0.4 | |
2,757,702 | - | Shewana3_2293 | 0.63 | +1.4 | |
2,757,728 | + | Shewana3_2293 | 0.66 | +1.4 | |
2,757,890 | + | Shewana3_2293 | 0.82 | +0.4 |
Or see this region's nucleotide sequence