Strain Fitness in Shewanella sp. ANA-3 around Shewana3_2261
Experiment: syringaldehyde 1 mM
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
| Position | Strand | Gene | LocusTag | Fraction | syringaldehyde 1 mM |
|---|---|---|---|---|---|
| remove | |||||
| 2,721,476 | + | +1.4 | |||
| 2,721,766 | - | Shewana3_2260 | 0.48 | +1.4 | |
| 2,723,113 | - | Shewana3_2261 | 0.65 | +0.5 | |
| 2,723,513 | - | +1.2 | |||
| 2,723,521 | + | +0.4 | |||
| 2,723,732 | - | +1.1 | |||
| 2,723,739 | - | -0.9 | |||
| 2,723,757 | - | -0.1 | |||
| 2,723,873 | + | Shewana3_2262 | 0.21 | -1.6 | |
| 2,723,895 | - | Shewana3_2262 | 0.24 | -0.6 | |
| 2,723,938 | - | Shewana3_2262 | 0.30 | -0.4 | |
| 2,724,178 | - | Shewana3_2262 | 0.66 | -1.1 | |
| 2,724,198 | - | Shewana3_2262 | 0.69 | +3.8 | |
| 2,724,220 | + | Shewana3_2262 | 0.72 | +0.2 |
Or see this region's nucleotide sequence