Strain Fitness in Shewanella sp. ANA-3 around Shewana3_2179

Experiment: syringaldehyde 1 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	syringaldehyde 1 mM
2,612,539	-		Shewana3_2177	0.88	+0.5
2,612,760	+				+1.5
2,612,783	+				+0.5
2,612,804	+				-0.1
2,612,902	-		Shewana3_2178	0.20	-0.1
2,612,957	+		Shewana3_2178	0.33	+0.5
2,612,957	+		Shewana3_2178	0.33	+1.5
2,613,005	+		Shewana3_2178	0.44	-0.1
2,613,084	+		Shewana3_2178	0.63	+2.5
2,613,106	+		Shewana3_2178	0.68	+0.5
2,613,106	+		Shewana3_2178	0.68	-1.1
2,613,106	+		Shewana3_2178	0.68	+0.5
2,613,106	+		Shewana3_2178	0.68	-0.1
2,613,114	-		Shewana3_2178	0.70	-0.3
2,613,221	+				+0.5
2,613,226	+				+0.5
2,613,385	+				-0.8
2,613,385	+				-0.3
2,613,385	+				-0.5
2,613,385	+				-0.0
2,613,385	+				-1.5
2,613,419	-				+0.5
2,613,438	+				+0.5
2,613,462	-				+1.5
2,613,462	-				+0.5
2,613,462	-				+1.5
2,613,464	-				+0.5
2,613,574	-		Shewana3_2179	0.11	+1.5
2,613,795	-		Shewana3_2179	0.36	-0.9
2,613,800	-		Shewana3_2179	0.36	+0.5
2,613,843	-		Shewana3_2179	0.41	+0.5
2,613,850	-		Shewana3_2179	0.42	-1.3
2,613,982	+		Shewana3_2179	0.56	+1.5
2,613,982	+		Shewana3_2179	0.56	+0.5
2,613,989	-		Shewana3_2179	0.57	+1.5
2,613,990	-		Shewana3_2179	0.57	-0.1
2,613,990	-				-0.1
2,614,042	-		Shewana3_2179	0.63	+1.5
2,614,081	-		Shewana3_2179	0.67	-0.1
2,614,101	-		Shewana3_2179	0.70	-0.5
2,614,160	-		Shewana3_2179	0.76	+1.5
2,614,194	+		Shewana3_2179	0.80	+0.5
2,614,202	-		Shewana3_2179	0.81	-1.9
2,614,202	-		Shewana3_2179	0.81	+0.9
2,614,204	+		Shewana3_2179	0.81	+1.5
2,614,305	+				-1.3
2,614,305	+				-0.5
2,614,313	-				-1.3
2,614,314	+				-0.1
2,614,332	+				-0.5
2,614,374	+				+0.5
2,614,390	-				+1.5
2,614,408	+				+0.5
2,614,432	-				+0.9
2,614,511	-				+0.9
2,614,558	+				+1.5
2,614,589	-				+0.9
2,614,613	-				-0.1
2,614,615	-				-0.3
2,614,647	+				+1.5
2,614,653	-				+1.0
2,614,653	-				+1.2
2,614,655	-				-0.4
2,614,655	-				+0.3
2,614,787	-				+1.5
2,614,787	-				-0.8
2,614,787	-				+1.1
2,614,789	-				+0.9
2,614,837	-				+0.6
2,614,837	-				+0.4
2,614,847	-				-1.4
2,614,847	-				+0.5
2,614,847	-				+0.5
2,614,863	-				-0.5
2,614,912	-				+0.8
2,614,920	-				+0.9
2,614,944	-		Shewana3_2180	0.12	+0.6
2,614,944	-		Shewana3_2180	0.12	+1.1
2,614,963	-		Shewana3_2180	0.19	+1.6
2,614,963	-		Shewana3_2180	0.19	+0.0
2,614,963	-		Shewana3_2180	0.19	+0.6
2,614,963	-		Shewana3_2180	0.19	-0.2
2,614,963	-		Shewana3_2180	0.19	+0.5
2,614,963	-		Shewana3_2180	0.19	+0.7
2,614,963	-		Shewana3_2180	0.19	+0.2
2,614,963	-		Shewana3_2180	0.19	+0.9
2,614,963	-		Shewana3_2180	0.19	+1.1
2,614,963	-		Shewana3_2180	0.19	+0.4
2,614,963	-		Shewana3_2180	0.19	+1.1
2,614,965	-		Shewana3_2180	0.20	+0.2
2,615,132	-		Shewana3_2180	0.76	-0.3
2,615,199	-				+1.5
2,615,244	-				+2.5
2,615,342	+				+1.5
2,615,342	+				+1.5
2,615,350	-				+0.4