Strain Fitness in Shewanella sp. ANA-3 around Shewana3_2133
Experiment: syringaldehyde 1 mM
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
| Position | Strand | Gene | LocusTag | Fraction | syringaldehyde 1 mM |
|---|---|---|---|---|---|
| remove | |||||
| 2,558,169 | + | Shewana3_2132 | 0.33 | -1.1 | |
| 2,558,177 | - | Shewana3_2132 | 0.34 | -0.4 | |
| 2,558,213 | - | Shewana3_2132 | 0.38 | +0.8 | |
| 2,558,318 | - | Shewana3_2132 | 0.48 | +0.2 | |
| 2,558,472 | + | Shewana3_2132 | 0.63 | +1.5 | |
| 2,558,534 | + | Shewana3_2132 | 0.69 | +2.1 | |
| 2,558,694 | + | Shewana3_2132 | 0.84 | -1.1 | |
| 2,558,803 | - | -0.5 | |||
| 2,559,042 | + | -2.4 | |||
| 2,559,210 | + | Shewana3_2133 | 0.16 | +0.9 | |
| 2,559,506 | - | Shewana3_2133 | 0.77 | +0.5 | |
| 2,559,561 | + | Shewana3_2133 | 0.89 | +0.4 |
Or see this region's nucleotide sequence