Strain Fitness in Shewanella sp. ANA-3 around Shewana3_1970
Experiment: syringaldehyde 1 mM
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | syringaldehyde 1 mM |
---|---|---|---|---|---|
remove | |||||
2,346,117 | - | -0.5 | |||
2,346,119 | + | -0.5 | |||
2,346,127 | - | -0.0 | |||
2,346,151 | + | Shewana3_1970 | 0.13 | +1.5 | |
2,346,176 | + | Shewana3_1970 | 0.17 | -0.8 | |
2,346,230 | + | Shewana3_1970 | 0.25 | -0.6 | |
2,346,295 | + | Shewana3_1970 | 0.34 | -0.5 | |
2,346,341 | + | Shewana3_1970 | 0.41 | +1.5 | |
2,346,356 | + | Shewana3_1970 | 0.43 | +1.5 | |
2,346,521 | + | +1.5 | |||
2,346,545 | - | Shewana3_1970 | 0.71 | -0.8 | |
2,346,723 | - | +1.2 | |||
2,347,511 | + | +1.0 | |||
2,347,522 | + | -1.6 | |||
2,347,530 | - | +0.6 | |||
2,347,722 | + | -0.8 | |||
2,347,727 | + | +0.3 | |||
2,347,735 | - | -0.0 |
Or see this region's nucleotide sequence