Strain Fitness in Shewanella sp. ANA-3 around Shewana3_1889

Experiment: syringaldehyde 1 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	syringaldehyde 1 mM
2,238,243	+		Shewana3_1888	0.84	+0.9
2,238,322	+		Shewana3_1888	0.87	-0.9
2,238,330	-		Shewana3_1888	0.88	+0.5
2,238,702	+				+1.5
2,238,716	+				+1.5
2,238,743	-				+1.7
2,238,824	+				-1.3
2,238,889	+				-0.1
2,238,953	-				-1.1
2,238,998	+		Shewana3_1889	0.10	-0.1
2,239,138	-		Shewana3_1889	0.18	-0.8
2,239,568	+		Shewana3_1889	0.44	-1.3
2,239,578	+		Shewana3_1889	0.45	+1.5
2,239,595	-		Shewana3_1889	0.46	+0.7
2,239,779	+		Shewana3_1889	0.57	+0.5
2,240,645	-				+1.5
2,240,645	-				-0.8
2,240,686	-		Shewana3_1890	0.10	+0.5
2,240,992	+		Shewana3_1890	0.66	+1.5
2,241,071	+		Shewana3_1890	0.81	+1.5
2,241,481	-		Shewana3_1891	0.81	+0.7