Strain Fitness in Shewanella sp. ANA-3 around Shewana3_1722
Experiment: syringaldehyde 1 mM
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | syringaldehyde 1 mM |
---|---|---|---|---|---|
remove | |||||
2,024,404 | - | Shewana3_1721 | 0.32 | +0.7 | |
2,024,538 | - | Shewana3_1721 | 0.43 | -0.5 | |
2,024,540 | + | Shewana3_1721 | 0.43 | +1.5 | |
2,024,657 | + | Shewana3_1721 | 0.52 | +0.2 | |
2,024,753 | - | Shewana3_1721 | 0.60 | +0.5 | |
2,024,755 | + | Shewana3_1721 | 0.60 | -1.9 | |
2,024,832 | + | Shewana3_1721 | 0.66 | -2.2 | |
2,024,857 | + | Shewana3_1721 | 0.68 | -0.1 | |
2,024,932 | + | Shewana3_1721 | 0.74 | -0.9 | |
2,025,560 | + | Shewana3_1722 | 0.27 | -0.5 | |
2,025,614 | + | Shewana3_1722 | 0.34 | -1.5 | |
2,025,873 | + | Shewana3_1722 | 0.72 | -0.5 | |
2,026,333 | - | Shewana3_1723 | 0.18 | -0.9 | |
2,026,338 | - | Shewana3_1723 | 0.19 | -0.7 | |
2,026,538 | + | Shewana3_1723 | 0.34 | -0.1 | |
2,026,875 | + | Shewana3_1723 | 0.59 | -0.9 | |
2,027,063 | + | Shewana3_1723 | 0.72 | -0.8 |
Or see this region's nucleotide sequence