Strain Fitness in Shewanella sp. ANA-3 around Shewana3_1684
Experiment: syringaldehyde 1 mM
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
| Position | Strand | Gene | LocusTag | Fraction | syringaldehyde 1 mM |
|---|---|---|---|---|---|
| remove | |||||
| 1,978,369 | - | Shewana3_1683 | 0.12 | +0.5 | |
| 1,978,605 | + | Shewana3_1683 | 0.39 | -0.7 | |
| 1,978,641 | + | Shewana3_1683 | 0.43 | +0.1 | |
| 1,979,045 | + | Shewana3_1683 | 0.88 | -0.4 | |
| 1,979,053 | - | Shewana3_1683 | 0.88 | +1.0 | |
| 1,979,152 | - | -0.6 | |||
| 1,979,261 | - | -0.5 | |||
| 1,979,264 | - | -0.5 | |||
| 1,979,328 | - | +0.7 | |||
| 1,979,335 | - | -0.0 | |||
| 1,979,385 | + | -0.4 | |||
| 1,979,428 | + | Shewana3_1684 | 0.15 | +0.3 | |
| 1,979,436 | - | Shewana3_1684 | 0.17 | +1.0 | |
| 1,980,050 | - | Shewana3_1685 | 0.18 | +1.5 | |
| 1,980,271 | + | Shewana3_1685 | 0.45 | +0.3 | |
| 1,980,468 | - | Shewana3_1685 | 0.69 | -0.1 | |
| 1,980,468 | - | Shewana3_1685 | 0.69 | +1.5 | |
| 1,980,622 | + | Shewana3_1685 | 0.88 | -0.1 |
Or see this region's nucleotide sequence