Strain Fitness in Shewanella sp. ANA-3 around Shewana3_1672

Experiment: syringaldehyde 1 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	syringaldehyde 1 mM
1,963,693	-		Shewana3_1671	0.46	-0.7
1,963,725	-		Shewana3_1671	0.48	-1.3
1,963,766	+		Shewana3_1671	0.51	-1.9
1,963,786	+		Shewana3_1671	0.52	+0.7
1,963,786	+				+1.4
1,963,794	-		Shewana3_1671	0.52	+1.4
1,963,794	-		Shewana3_1671	0.52	-0.3
1,963,794	-		Shewana3_1671	0.52	-0.4
1,964,110	+		Shewana3_1671	0.72	+1.4
1,964,146	+		Shewana3_1671	0.74	-0.1
1,964,152	-		Shewana3_1671	0.75	-0.1
1,964,170	+		Shewana3_1671	0.76	-1.6
1,964,210	+		Shewana3_1671	0.78	+1.1
1,964,225	-		Shewana3_1671	0.79	-0.1
1,964,305	-		Shewana3_1671	0.84	+0.1
1,964,595	-				+1.8
1,964,654	-				+0.4
1,964,654	-				+0.2
1,964,654	-				+0.3
1,964,839	+		Shewana3_1672	0.15	-1.6
1,964,847	-		Shewana3_1672	0.16	-0.5
1,964,928	+		Shewana3_1672	0.23	+0.4
1,964,928	+		Shewana3_1672	0.23	+0.4
1,964,928	+		Shewana3_1672	0.23	-1.4
1,964,936	-		Shewana3_1672	0.24	-0.4
1,964,936	-		Shewana3_1672	0.24	+0.2
1,965,152	+		Shewana3_1672	0.42	-0.6
1,965,173	+		Shewana3_1672	0.44	-0.1
1,965,182	+		Shewana3_1672	0.45	-1.6
1,965,359	+		Shewana3_1672	0.60	-0.1
1,965,504	-		Shewana3_1672	0.72	-1.4
1,965,530	+		Shewana3_1672	0.75	-3.5
1,965,530	+		Shewana3_1672	0.75	-0.7
1,965,612	+		Shewana3_1672	0.82	-1.4
1,965,810	+				+0.3
1,965,810	+				-1.4
1,965,848	-				+0.4
1,965,896	+				-1.0
1,965,904	-				-0.4
1,965,904	-				+0.2
1,965,978	+				-0.4
1,966,062	-		Shewana3_1673	0.20	-0.5
1,966,125	-		Shewana3_1673	0.36	-0.7
1,966,125	-		Shewana3_1673	0.36	-0.1
1,966,219	-		Shewana3_1673	0.59	-0.3
1,966,219	-		Shewana3_1673	0.59	+0.0
1,966,219	-		Shewana3_1673	0.59	+0.8
1,966,241	-		Shewana3_1673	0.64	-0.1
1,966,539	-				-1.1
1,966,716	+				-0.1
1,966,724	-				+0.3
1,966,789	-				+0.9
1,966,803	-				-0.7