Strain Fitness in Shewanella sp. ANA-3 around Shewana3_1612

Experiment: syringaldehyde 1 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	syringaldehyde 1 mM
1,894,053	+		Shewana3_1611	0.30	+1.4
1,894,058	+		Shewana3_1611	0.32	-0.4
1,894,058	+		Shewana3_1611	0.32	-0.6
1,894,063	+		Shewana3_1611	0.34	+0.4
1,894,063	+		Shewana3_1611	0.34	-0.6
1,894,063	+		Shewana3_1611	0.34	-0.6
1,894,063	+		Shewana3_1611	0.34	-0.2
1,894,066	-		Shewana3_1611	0.35	+0.4
1,894,066	-		Shewana3_1611	0.35	-0.6
1,894,071	-		Shewana3_1611	0.37	+1.4
1,894,071	-				+1.4
1,894,454	+				+1.4
1,894,454	+				-1.6
1,894,459	+				+0.8
1,894,459	+				-0.9
1,894,516	-				+1.4
1,894,645	-				-1.4
1,894,807	-				+0.4
1,894,842	-				-0.2
1,894,859	-				-0.6
1,894,916	-				+0.4
1,894,981	+				+0.2
1,894,981	+				+0.4
1,895,016	+		Shewana3_1612	0.11	+1.4
1,895,024	-		Shewana3_1612	0.11	-1.1
1,895,071	-		Shewana3_1612	0.14	-0.6
1,895,135	+		Shewana3_1612	0.17	+0.4
1,895,219	-		Shewana3_1612	0.22	-0.1
1,895,232	+		Shewana3_1612	0.23	+0.4
1,895,254	+		Shewana3_1612	0.24	+1.4
1,895,266	-		Shewana3_1612	0.24	+1.4
1,895,267	+		Shewana3_1612	0.24	+0.4
1,895,307	+		Shewana3_1612	0.27	+1.4
1,895,315	-		Shewana3_1612	0.27	+1.4
1,895,318	+		Shewana3_1612	0.27	+0.7
1,895,340	-		Shewana3_1612	0.28	+1.4
1,895,464	+		Shewana3_1612	0.35	+1.4
1,895,464	+		Shewana3_1612	0.35	+0.4
1,895,474	+		Shewana3_1612	0.36	+0.9
1,895,504	+		Shewana3_1612	0.37	+1.4
1,895,514	-		Shewana3_1612	0.38	+1.4
1,895,530	+		Shewana3_1612	0.39	+1.4
1,895,530	+		Shewana3_1612	0.39	+1.4
1,895,530	+		Shewana3_1612	0.39	+1.4
1,895,530	+		Shewana3_1612	0.39	-1.1
1,895,530	+		Shewana3_1612	0.39	-0.6
1,895,530	+		Shewana3_1612	0.39	+1.4
1,895,533	-		Shewana3_1612	0.39	+1.4
1,895,533	-		Shewana3_1612	0.39	-0.9
1,895,538	-		Shewana3_1612	0.39	+1.4
1,895,538	-		Shewana3_1612	0.39	+0.4
1,895,538	-		Shewana3_1612	0.39	-0.1
1,895,543	+		Shewana3_1612	0.39	-0.6
1,895,607	-		Shewana3_1612	0.43	+0.4
1,895,639	+		Shewana3_1612	0.44	-0.1
1,895,916	-		Shewana3_1612	0.59	-1.1
1,895,985	+		Shewana3_1612	0.63	+0.9
1,896,038	+		Shewana3_1612	0.66	+1.4
1,896,044	+		Shewana3_1612	0.66	+0.4
1,896,044	+		Shewana3_1612	0.66	-0.1
1,896,046	+		Shewana3_1612	0.66	-0.9
1,896,069	-		Shewana3_1612	0.67	-0.9
1,896,207	+		Shewana3_1612	0.75	-0.1
1,896,209	+		Shewana3_1612	0.75	+1.4
1,896,217	-		Shewana3_1612	0.75	+1.4
1,896,443	+		Shewana3_1612	0.87	-0.6
1,896,443	+		Shewana3_1612	0.87	+0.4
1,896,443	+		Shewana3_1612	0.87	+1.4
1,896,456	+		Shewana3_1612	0.88	+0.4
1,896,504	+				+1.4
1,896,598	+				-1.6
1,896,605	+				+0.5
1,896,606	-				-0.1
1,896,719	+				-1.1
1,896,801	-				+0.5
1,896,851	-				+1.4
1,897,235	+		Shewana3_1613	0.25	+0.8
1,897,240	+		Shewana3_1613	0.25	+1.4
1,897,240	+		Shewana3_1613	0.25	-1.6
1,897,240	+		Shewana3_1613	0.25	-0.9
1,897,245	+		Shewana3_1613	0.26	+0.7
1,897,248	+		Shewana3_1613	0.26	+0.4
1,897,248	+		Shewana3_1613	0.26	-0.6
1,897,362	+		Shewana3_1613	0.31	+0.4
1,897,398	+		Shewana3_1613	0.33	-1.2
1,897,398	+		Shewana3_1613	0.33	+0.4
1,897,412	+		Shewana3_1613	0.34	-0.3
1,897,412	-		Shewana3_1613	0.34	-0.2
1,897,427	+		Shewana3_1613	0.35	+0.4
1,897,427	-		Shewana3_1613	0.35	-0.6
1,897,437	+		Shewana3_1613	0.35	+0.4
1,897,549	+		Shewana3_1613	0.41	+0.6
1,897,549	+		Shewana3_1613	0.41	-1.6
1,897,549	+		Shewana3_1613	0.41	-1.7
1,897,549	+		Shewana3_1613	0.41	+0.9
1,897,549	+		Shewana3_1613	0.41	+0.8
1,897,549	+		Shewana3_1613	0.41	+0.9
1,897,555	+		Shewana3_1613	0.41	-0.3
1,897,556	+		Shewana3_1613	0.41	+0.0
1,897,557	-		Shewana3_1613	0.41	+0.4
1,897,557	-		Shewana3_1613	0.41	+1.4
1,897,557	-		Shewana3_1613	0.41	+1.4
1,897,557	-		Shewana3_1613	0.41	+0.4
1,897,561	+		Shewana3_1613	0.42	-1.4
1,897,561	+		Shewana3_1613	0.42	-0.9
1,897,561	+		Shewana3_1613	0.42	+0.4
1,897,564	-		Shewana3_1613	0.42	+0.4
1,897,564	-		Shewana3_1613	0.42	+0.4
1,897,564	-		Shewana3_1613	0.42	-1.2
1,897,596	+		Shewana3_1613	0.43	-0.8
1,897,602	+		Shewana3_1613	0.44	+0.4
1,897,602	+		Shewana3_1613	0.44	+0.5
1,897,610	-		Shewana3_1613	0.44	+0.4
1,897,610	-		Shewana3_1613	0.44	-0.6
1,897,610	-		Shewana3_1613	0.44	+1.4
1,897,620	-		Shewana3_1613	0.44	-0.2
1,897,622	-		Shewana3_1613	0.45	-0.2