Strain Fitness in Shewanella sp. ANA-3 around Shewana3_1498
Experiment: syringaldehyde 1 mM
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | syringaldehyde 1 mM |
---|---|---|---|---|---|
remove | |||||
1,745,318 | + | Shewana3_1497 | 0.75 | +0.4 | |
1,745,344 | + | Shewana3_1497 | 0.76 | -0.2 | |
1,745,396 | - | Shewana3_1497 | 0.79 | -1.7 | |
1,745,443 | + | Shewana3_1497 | 0.81 | -0.1 | |
1,745,499 | + | Shewana3_1497 | 0.83 | -0.7 | |
1,745,568 | + | Shewana3_1497 | 0.86 | +1.2 | |
1,745,580 | - | Shewana3_1497 | 0.87 | +1.4 | |
1,746,293 | + | +0.1 | |||
1,746,416 | - | Shewana3_1498 | 0.35 | -0.8 | |
1,747,079 | - | Shewana3_1499 | 0.16 | -0.9 | |
1,747,110 | + | Shewana3_1499 | 0.18 | +0.1 | |
1,747,320 | + | Shewana3_1499 | 0.32 | -0.3 | |
1,747,597 | + | Shewana3_1499 | 0.51 | -0.3 | |
1,747,619 | + | Shewana3_1499 | 0.53 | +0.3 |
Or see this region's nucleotide sequence