Strain Fitness in Shewanella sp. ANA-3 around Shewana3_1481
Experiment: syringaldehyde 1 mM
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | syringaldehyde 1 mM |
---|---|---|---|---|---|
remove | |||||
1,724,555 | + | Shewana3_1481 | 0.31 | +0.4 | |
1,724,716 | + | Shewana3_1481 | 0.51 | -2.4 | |
1,725,210 | + | +1.4 | |||
1,725,334 | - | Shewana3_1482 | 0.21 | -1.0 | |
1,725,450 | + | Shewana3_1482 | 0.44 | -0.7 | |
1,725,458 | - | Shewana3_1482 | 0.46 | +1.4 | |
1,725,591 | - | Shewana3_1482 | 0.73 | +0.4 | |
1,725,976 | + | -0.5 | |||
1,725,976 | + | -0.2 | |||
1,726,041 | - | +0.4 | |||
1,726,051 | + | -0.4 |
Or see this region's nucleotide sequence