Strain Fitness in Shewanella sp. ANA-3 around Shewana3_1404

Experiment: syringaldehyde 1 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	syringaldehyde 1 mM
1,621,129	+		Shewana3_1403	0.78	+0.0
1,621,146	-		Shewana3_1403	0.79	-1.3
1,621,159	+		Shewana3_1403	0.79	-1.3
1,621,159	+		Shewana3_1403	0.79	-0.6
1,621,159	+		Shewana3_1403	0.79	+0.1
1,621,159	+		Shewana3_1403	0.79	-0.9
1,621,167	-		Shewana3_1403	0.80	+0.9
1,621,167	-		Shewana3_1403	0.80	-0.3
1,621,167	-		Shewana3_1403	0.80	-1.7
1,621,195	+		Shewana3_1403	0.81	-1.3
1,621,225	-		Shewana3_1403	0.82	+1.3
1,621,283	+		Shewana3_1403	0.83	-1.3
1,621,291	-		Shewana3_1403	0.84	+0.3
1,621,291	-		Shewana3_1403	0.84	+0.7
1,621,323	-				+0.3
1,621,330	-		Shewana3_1403	0.85	+1.3
1,621,334	+		Shewana3_1403	0.85	-0.7
1,621,459	-		Shewana3_1403	0.89	+1.3
1,621,461	+		Shewana3_1403	0.89	+0.6
1,621,477	+		Shewana3_1403	0.90	-0.1
1,621,539	-				-1.0
1,621,553	-				-0.3
1,621,671	+				-0.1
1,621,676	+				-0.3
1,621,699	-				-1.9
1,621,710	+				-1.1
1,621,714	-				+0.1
1,621,718	-				-2.1
1,621,837	-				+0.3
1,621,837	-				+0.7
1,621,921	-				-0.4
1,621,943	+				-1.0
1,621,977	-				+0.3
1,622,071	-		Shewana3_1404	0.20	-2.0
1,622,135	-		Shewana3_1404	0.36	+0.5
1,622,147	-		Shewana3_1404	0.39	-0.5
1,622,148	-		Shewana3_1404	0.40	-2.3
1,622,193	-		Shewana3_1404	0.51	-1.6
1,622,193	-		Shewana3_1404	0.51	-1.1
1,622,238	-		Shewana3_1404	0.63	-0.3
1,622,238	-		Shewana3_1404	0.63	-0.9
1,622,262	-		Shewana3_1404	0.69	-2.2
1,622,317	-		Shewana3_1404	0.83	-0.7
1,622,320	-		Shewana3_1404	0.83	-0.7
1,622,346	-				-2.3
1,622,346	-				+0.0
1,622,413	-				-0.7
1,622,448	+				+1.3
1,622,456	-				-0.3
1,622,529	+				+0.0
1,622,537	+				+1.0
1,622,554	+				-0.3
1,622,564	+				+0.1
1,622,572	-				-1.4
1,622,572	-				+0.1
1,622,595	+				-0.6
1,622,610	-				+0.4
1,622,616	-				+0.7
1,622,628	+				-0.2
1,622,725	+				+0.5
1,622,733	-				-0.3
1,622,747	+				-0.3
1,622,784	+		Shewana3_1405	0.12	+0.6
1,622,799	+		Shewana3_1405	0.14	-0.3
1,622,863	-		Shewana3_1405	0.22	-0.0
1,622,913	-		Shewana3_1405	0.29	-1.3
1,622,926	-		Shewana3_1405	0.31	-0.3
1,622,931	-		Shewana3_1405	0.31	-0.9
1,622,965	+		Shewana3_1405	0.36	+0.0
1,622,967	+		Shewana3_1405	0.36	-0.2
1,623,062	+		Shewana3_1405	0.49	-0.6
1,623,159	-		Shewana3_1405	0.62	+1.7
1,623,186	+		Shewana3_1405	0.65	-0.2
1,623,196	-		Shewana3_1405	0.67	+0.3
1,623,264	+		Shewana3_1405	0.76	+0.0