Strain Fitness in Shewanella sp. ANA-3 around Shewana3_1399
Experiment: syringaldehyde 1 mM
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | syringaldehyde 1 mM |
---|---|---|---|---|---|
remove | |||||
1,615,531 | + | -0.7 | |||
1,615,599 | - | Shewana3_1399 | 0.14 | -0.2 | |
1,615,687 | + | Shewana3_1399 | 0.28 | -0.3 | |
1,615,701 | - | Shewana3_1399 | 0.30 | -0.7 | |
1,615,771 | - | Shewana3_1399 | 0.41 | -0.8 | |
1,616,074 | + | Shewana3_1399 | 0.89 | +1.3 | |
1,616,356 | + | Shewana3_1400 | 0.29 | -1.3 | |
1,616,709 | - | Shewana3_1400 | 0.77 | -0.1 | |
1,616,831 | + | -0.7 | |||
1,616,955 | + | -0.2 | |||
1,616,963 | - | -0.7 | |||
1,617,028 | + | Shewana3_1401 | 0.15 | +1.2 | |
1,617,028 | + | Shewana3_1401 | 0.15 | +0.1 | |
1,617,036 | - | Shewana3_1401 | 0.17 | -0.1 |
Or see this region's nucleotide sequence