Strain Fitness in Shewanella sp. ANA-3 around Shewana3_1378

Experiment: syringaldehyde 1 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	syringaldehyde 1 mM
1,592,668	-				-0.3
1,592,885	+		Shewana3_1377	0.22	+2.2
1,592,922	+		Shewana3_1377	0.25	-1.5
1,593,007	+		Shewana3_1377	0.34	+2.1
1,593,007	+		Shewana3_1377	0.34	+3.9
1,593,009	+		Shewana3_1377	0.34	+2.3
1,593,125	+		Shewana3_1377	0.46	+3.6
1,593,125	+		Shewana3_1377	0.46	+4.3
1,593,125	+		Shewana3_1377	0.46	+2.1
1,593,139	+		Shewana3_1377	0.47	+2.8
1,593,155	+		Shewana3_1377	0.49	+2.5
1,593,184	+		Shewana3_1377	0.52	+2.0
1,593,184	+		Shewana3_1377	0.52	+4.2
1,593,214	+		Shewana3_1377	0.55	+4.0
1,593,214	+		Shewana3_1377	0.55	+3.2
1,593,219	+		Shewana3_1377	0.55	+4.0
1,593,219	+		Shewana3_1377	0.55	+2.4
1,593,219	+		Shewana3_1377	0.55	+1.9
1,593,280	+		Shewana3_1377	0.62	+3.8
1,593,483	+		Shewana3_1377	0.82	+2.1
1,593,483	+		Shewana3_1377	0.82	+2.0
1,593,483	+		Shewana3_1377	0.82	+2.3
1,593,483	+		Shewana3_1377	0.82	+3.6
1,593,483	+		Shewana3_1377	0.82	+1.9
1,593,491	+		Shewana3_1377	0.83	+4.1
1,593,493	+		Shewana3_1377	0.83	+2.5
1,593,501	+		Shewana3_1377	0.84	+4.5
1,593,529	+		Shewana3_1377	0.87	+2.4
1,593,660	+				+1.3
1,593,697	+				+3.7
1,593,697	+				+3.9
1,593,697	+				+2.6
1,593,697	+				+1.5
1,593,697	+				+3.6
1,593,697	+				+2.3
1,593,697	+				+3.9
1,593,727	+				+3.6
1,593,826	+		Shewana3_1378	0.22	+2.6
1,593,834	-		Shewana3_1378	0.23	+1.3
1,593,837	+		Shewana3_1378	0.24	+3.2
1,593,888	+		Shewana3_1378	0.30	+3.9
1,593,946	+		Shewana3_1378	0.38	+2.3
1,594,010	+		Shewana3_1378	0.47	+3.8
1,594,018	+		Shewana3_1378	0.48	+2.0
1,594,123	+		Shewana3_1378	0.62	+2.5
1,594,125	+		Shewana3_1378	0.62	+3.9
1,594,125	+		Shewana3_1378	0.62	+2.6
1,594,125	+		Shewana3_1378	0.62	+3.7
1,594,125	+		Shewana3_1378	0.62	+2.6
1,594,125	+		Shewana3_1378	0.62	+2.6
1,594,125	+		Shewana3_1378	0.62	+2.4
1,594,125	+		Shewana3_1378	0.62	+2.5
1,594,125	+		Shewana3_1378	0.62	+2.6
1,594,125	+		Shewana3_1378	0.62	+2.5
1,594,125	+		Shewana3_1378	0.62	+4.5
1,594,125	+		Shewana3_1378	0.62	+4.1
1,594,133	-		Shewana3_1378	0.63	+0.3
1,594,133	-		Shewana3_1378	0.63	+1.3
1,594,149	+		Shewana3_1378	0.65	+2.6
1,594,180	+		Shewana3_1378	0.69	+3.0
1,594,184	+		Shewana3_1378	0.70	+2.3
1,594,185	+		Shewana3_1378	0.70	+2.5
1,594,185	+		Shewana3_1378	0.70	+2.8
1,594,186	+		Shewana3_1378	0.70	+2.6
1,594,217	+		Shewana3_1378	0.74	+4.1
1,594,226	+		Shewana3_1378	0.75	+2.3
1,594,226	+		Shewana3_1378	0.75	+4.6
1,594,226	+		Shewana3_1378	0.75	+4.0
1,594,226	+		Shewana3_1378	0.75	+2.4
1,594,321	+		Shewana3_1378	0.88	+3.8
1,594,321	+		Shewana3_1378	0.88	+2.7
1,594,380	+				+2.6