Strain Fitness in Shewanella sp. ANA-3 around Shewana3_1333

Experiment: syringaldehyde 1 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	syringaldehyde 1 mM
1,545,601	+				+0.5
1,545,629	+		Shewana3_1332	0.13	+0.3
1,545,700	+		Shewana3_1332	0.22	+0.2
1,545,700	+		Shewana3_1332	0.22	-0.1
1,545,713	-		Shewana3_1332	0.23	-1.3
1,546,130	-		Shewana3_1332	0.74	-1.0
1,546,221	+		Shewana3_1332	0.85	+0.4
1,546,244	-		Shewana3_1332	0.88	+0.8
1,546,548	+				+0.7
1,546,556	-				+1.0
1,546,680	+				+2.3
1,546,734	-		Shewana3_1333	0.16	+0.7
1,546,798	-		Shewana3_1333	0.24	-2.2
1,546,889	-		Shewana3_1333	0.35	-1.0
1,546,916	+		Shewana3_1333	0.39	+2.0
1,547,038	-		Shewana3_1333	0.54	-1.2
1,547,053	+		Shewana3_1333	0.56	+0.8
1,547,060	+		Shewana3_1333	0.56	+0.9
1,547,068	-		Shewana3_1333	0.57	-1.5
1,547,138	+		Shewana3_1333	0.66	+2.0
1,547,273	-		Shewana3_1333	0.83	-0.7
1,547,674	+		Shewana3_1334	0.34	+0.3
1,547,674	+		Shewana3_1334	0.34	-0.3
1,547,674	+		Shewana3_1334	0.34	-0.2
1,547,682	-		Shewana3_1334	0.36	-2.8
1,547,694	-		Shewana3_1334	0.39	-1.2
1,547,830	-		Shewana3_1334	0.74	+0.3
1,547,848	+		Shewana3_1334	0.79	-0.2
1,547,868	+		Shewana3_1334	0.84	+0.4