Strain Fitness in Shewanella sp. ANA-3 around Shewana3_1323

Experiment: syringaldehyde 1 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	syringaldehyde 1 mM
1,534,509	-				+0.3
1,534,630	-	flgB	Shewana3_1321	0.37	+1.3
1,534,825	-	flgB	Shewana3_1321	0.85	-1.5
1,535,096	+	flgC	Shewana3_1322	0.50	+1.1
1,535,231	+	flgC	Shewana3_1322	0.82	+0.8
1,535,267	+				+1.4
1,535,482	+	flgD	Shewana3_1323	0.20	+1.6
1,535,490	+	flgD	Shewana3_1323	0.21	+1.0
1,535,490	+	flgD	Shewana3_1323	0.21	+1.6
1,535,490	-	flgD	Shewana3_1323	0.21	+0.5
1,535,498	-	flgD	Shewana3_1323	0.22	+0.3
1,535,769	-	flgD	Shewana3_1323	0.56	+0.3
1,535,854	-	flgD	Shewana3_1323	0.67	-1.0
1,535,861	+	flgD	Shewana3_1323	0.68	+1.3
1,536,068	+				+0.7
1,536,076	-				-1.3
1,536,223	+				+1.1
1,536,255	+				+0.8
1,536,271	+				+0.8
1,536,737	+	flgE	Shewana3_1324	0.41	+1.3
1,536,744	-	flgE	Shewana3_1324	0.42	+1.3
1,536,902	+	flgE	Shewana3_1324	0.53	+1.2
1,536,983	-	flgE	Shewana3_1324	0.59	+1.3
1,536,985	+	flgE	Shewana3_1324	0.59	+1.9