Strain Fitness in Shewanella sp. ANA-3 around Shewana3_1236

Experiment: syringaldehyde 1 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	syringaldehyde 1 mM
1,441,103	-		Shewana3_1235	0.68	-2.0
1,441,195	-		Shewana3_1235	0.74	-2.4
1,441,405	+		Shewana3_1235	0.88	-1.8
1,441,576	-				-1.3
1,441,755	-				-2.0
1,441,825	-				-1.7
1,441,825	-				-2.3
1,441,882	+	guaA	Shewana3_1236	0.12	-0.7
1,441,899	+	guaA	Shewana3_1236	0.13	-3.5
1,441,975	+	guaA	Shewana3_1236	0.18	-1.6
1,442,278	-	guaA	Shewana3_1236	0.37	-1.0
1,442,392	+	guaA	Shewana3_1236	0.44	-2.0
1,442,392	+	guaA	Shewana3_1236	0.44	-2.6
1,442,408	-	guaA	Shewana3_1236	0.45	-3.0
1,442,426	+	guaA	Shewana3_1236	0.47	-2.4
1,442,703	+	guaA	Shewana3_1236	0.64	-0.7
1,442,746	-	guaA	Shewana3_1236	0.67	-2.3
1,442,746	-	guaA	Shewana3_1236	0.67	-2.0
1,443,003	-	guaA	Shewana3_1236	0.83	-2.8
1,443,057	-	guaA	Shewana3_1236	0.87	+0.3
1,443,085	+	guaA	Shewana3_1236	0.88	-2.3
1,443,186	-				-1.0
1,443,268	+				-0.6
1,443,446	-				+0.3
1,443,471	+				+0.0
1,443,471	+				+0.5
1,443,471	+				-1.3
1,443,479	-				-2.5
1,443,590	+				+0.6
1,443,682	-				-1.3
1,443,766	-				-0.3
1,444,053	+		Shewana3_1237	0.11	-0.9
1,444,122	+		Shewana3_1237	0.13	+0.3
1,444,137	-		Shewana3_1237	0.13	-0.4
1,444,169	-		Shewana3_1237	0.14	-0.0