Strain Fitness in Shewanella sp. ANA-3 around Shewana3_1018

Experiment: syringaldehyde 1 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	syringaldehyde 1 mM
1,188,358	+				-0.5
1,188,358	+				-0.1
1,188,444	+				-0.2
1,188,478	+				-0.1
1,188,493	-				-0.2
1,188,655	-		Shewana3_1017	0.25	+1.4
1,188,686	-		Shewana3_1017	0.31	-1.1
1,189,501	-		Shewana3_1018	0.35	-2.4
1,189,622	-		Shewana3_1018	0.58	-0.2
1,190,095	-				+0.0
1,190,129	+				+0.2
1,190,309	-				-1.0
1,190,311	-				-0.9
1,190,346	+				+0.2
1,190,375	-				-0.2
1,190,424	-	secD	Shewana3_1019	0.11	-0.6
1,190,482	+	secD	Shewana3_1019	0.14	-0.2
1,190,496	-	secD	Shewana3_1019	0.15	-0.1
1,190,522	-	secD	Shewana3_1019	0.16	+0.4
1,190,582	+	secD	Shewana3_1019	0.19	+1.0
1,190,582	+	secD	Shewana3_1019	0.19	+1.2
1,190,582	+	secD	Shewana3_1019	0.19	-1.3
1,190,590	-	secD	Shewana3_1019	0.20	-2.2
1,190,590	-	secD	Shewana3_1019	0.20	-0.1
1,190,617	+	secD	Shewana3_1019	0.21	-0.2