Strain Fitness in Shewanella sp. ANA-3 around Shewana3_0002

Experiment: syringaldehyde 1 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	syringaldehyde 1 mM
148	+	gidB	Shewana3_0001	0.18	+0.7
279	-	gidB	Shewana3_0001	0.39	-0.5
331	-	gidB	Shewana3_0001	0.47	+0.3
377	+	gidB	Shewana3_0001	0.54	-0.1
385	-	gidB	Shewana3_0001	0.56	-0.2
385	-	gidB	Shewana3_0001	0.56	+0.3
439	-	gidB	Shewana3_0001	0.64	+0.1
479	+	gidB	Shewana3_0001	0.71	-0.8
479	+	gidB	Shewana3_0001	0.71	-0.5
479	+	gidB	Shewana3_0001	0.71	-0.5
479	+	gidB	Shewana3_0001	0.71	-0.2
479	+	gidB	Shewana3_0001	0.71	+0.2
487	-	gidB	Shewana3_0001	0.72	+0.5
487	-	gidB	Shewana3_0001	0.72	-0.5
516	-	gidB	Shewana3_0001	0.77	+0.1
547	-	gidB	Shewana3_0001	0.82	-0.2
645	-				+0.7
651	+				-0.5
664	-				+0.0
1,092	-		Shewana3_0002	0.17	-1.1
1,404	+				+0.1
1,766	-		Shewana3_0002	0.52	-1.1
1,887	+		Shewana3_0002	0.59	+0.2
2,206	+		Shewana3_0002	0.76	-1.3
2,214	-		Shewana3_0002	0.76	-1.7
2,411	+		Shewana3_0002	0.86	-2.1
2,466	+		Shewana3_0002	0.89	+0.7
2,497	+				-2.1
2,504	-				+0.7