Strain Fitness in Bacteroides thetaiotaomicron VPI-5482 around BT4523

Experiment: BHIS with Fusidic 0.004 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	BHIS with Fusidic 0.004 mg/ml
5,941,357	-		BT4521	0.42	-0.8
5,941,365	+		BT4521	0.43	+1.4
5,941,471	-		BT4521	0.56	+0.4
5,941,481	-		BT4521	0.58	-0.0
5,941,491	-		BT4521	0.59	-1.9
5,941,507	-		BT4521	0.61	+0.5
5,941,573	-		BT4521	0.69	+0.4
5,941,632	-		BT4521	0.76	-2.8
5,941,688	+		BT4521	0.83	-0.2
5,941,689	-		BT4521	0.84	-2.6
5,941,691	-		BT4521	0.84	-0.6
5,941,764	-				+0.1
5,941,833	+				-2.4
5,941,858	+				-0.5
5,941,858	+				-0.3
5,941,858	+				-0.0
5,941,863	+				+2.2
5,941,866	-				+0.7
5,941,878	-				+1.4
5,941,878	-				+0.7
5,941,919	-		BT4522	0.17	-1.2
5,941,921	+		BT4522	0.18	+0.4
5,942,029	-		BT4522	0.38	-1.4
5,942,114	+		BT4522	0.54	-2.3
5,942,136	-		BT4522	0.59	-0.2
5,942,161	-		BT4522	0.63	+1.4
5,942,164	+		BT4522	0.64	+0.6
5,942,167	+		BT4522	0.64	+0.2
5,942,208	-		BT4522	0.72	-0.4
5,942,257	+		BT4522	0.81	-0.7
5,942,267	+		BT4522	0.83	-2.4
5,942,277	+		BT4522	0.85	-1.2
5,942,299	+		BT4522	0.89	+0.6
5,942,307	-				-1.9
5,942,308	+				-0.7
5,942,330	-				+0.6
5,942,330	-				+1.4
5,942,339	-				-2.0
5,942,352	+				-2.5
5,942,364	+				-0.5
5,942,406	-				-0.0
5,942,439	+				-1.2
5,942,439	+				-1.4
5,942,439	+				-1.0
5,942,440	-				-1.2
5,942,491	-		BT4523	0.12	-0.9
5,942,503	-		BT4523	0.13	+1.4
5,942,510	+		BT4523	0.14	+1.4
5,942,510	+		BT4523	0.14	+1.4
5,942,543	+		BT4523	0.16	-0.9
5,942,544	-		BT4523	0.16	-2.5
5,942,544	-		BT4523	0.16	-3.2
5,942,577	+		BT4523	0.19	+0.3
5,942,582	+		BT4523	0.20	-0.3
5,942,632	-		BT4523	0.24	-1.0
5,942,650	+		BT4523	0.25	+0.8
5,942,650	+		BT4523	0.25	+1.5
5,942,651	-		BT4523	0.25	-0.6
5,942,654	+		BT4523	0.26	-1.7
5,942,720	-		BT4523	0.31	-0.4
5,942,732	-		BT4523	0.32	+1.4
5,942,751	-		BT4523	0.34	-0.4
5,942,752	+		BT4523	0.34	-1.0
5,942,752	+		BT4523	0.34	-0.5
5,942,752	+		BT4523	0.34	-1.5
5,942,976	+		BT4523	0.53	+2.4
5,942,984	+		BT4523	0.54	-1.2
5,942,991	+		BT4523	0.54	-1.2
5,943,021	+		BT4523	0.57	-0.8
5,943,030	+		BT4523	0.57	+3.0
5,943,050	+		BT4523	0.59	-1.6
5,943,054	-		BT4523	0.59	+0.4
5,943,081	+		BT4523	0.62	-2.0
5,943,082	-		BT4523	0.62	-0.3
5,943,082	-		BT4523	0.62	-0.4
5,943,143	-		BT4523	0.67	+0.1
5,943,143	-		BT4523	0.67	-1.7
5,943,200	+		BT4523	0.72	-0.4
5,943,201	-		BT4523	0.72	-1.2
5,943,202	-		BT4523	0.72	-1.0
5,943,246	+		BT4523	0.76	-0.3
5,943,279	-		BT4523	0.78	-0.6
5,943,311	+		BT4523	0.81	+0.7
5,943,312	-		BT4523	0.81	-0.1
5,943,355	-		BT4523	0.85	-1.5
5,943,377	+		BT4523	0.87	+0.5
5,943,377	+		BT4523	0.87	-0.2
5,943,378	-		BT4523	0.87	+0.7
5,943,378	-		BT4523	0.87	-0.7
5,943,380	-		BT4523	0.87	-2.3
5,943,425	+				+1.0
5,943,426	-				-0.9
5,943,454	-				-0.2
5,943,533	+				-0.9
5,943,533	+				+0.4
5,943,535	+				+0.2
5,943,536	-				-1.1
5,943,595	+		BT4524	0.26	+0.1
5,943,595	+		BT4524	0.26	-1.7
5,943,599	+		BT4524	0.27	-1.3
5,943,640	+		BT4524	0.41	+0.6
5,943,670	+		BT4524	0.52	-0.7
5,943,779	-		BT4524	0.89	-1.1
5,943,798	+				+2.0
5,943,889	+				-1.9
5,943,978	+				+2.0
5,944,034	+				-1.4
5,944,035	-				-0.3
5,944,037	+				-0.5
5,944,095	+		BT4525	0.27	-4.9
5,944,096	-		BT4525	0.27	-1.8
5,944,159	+		BT4525	0.49	+0.3
5,944,160	-		BT4525	0.49	+0.4
5,944,266	-		BT4525	0.87	+0.8
5,944,312	-				+0.5
5,944,318	-				+0.4
5,944,318	-				+1.0
5,944,323	+				-2.4
5,944,324	-				+1.6
5,944,368	-				-0.9
5,944,401	-				-1.4
5,944,450	+				-1.6
5,944,454	+				+0.7
5,944,454	+				+0.7
5,944,455	-				-0.4
5,944,455	-				-0.8
5,944,458	-				-2.6