Strain Fitness in Bacteroides thetaiotaomicron VPI-5482 around BT4431

Experiment: BHIS with Fusidic 0.004 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	BHIS with Fusidic 0.004 mg/ml
5,837,137	+		BT4430	0.70	-0.3
5,837,232	-		BT4430	0.74	+0.9
5,837,283	-		BT4430	0.76	+0.4
5,837,283	-		BT4430	0.76	-2.0
5,837,312	-		BT4430	0.78	-0.9
5,837,354	+		BT4430	0.79	+1.1
5,837,462	+		BT4430	0.84	+1.4
5,837,462	+		BT4430	0.84	+0.9
5,837,463	-		BT4430	0.84	+1.2
5,837,492	+		BT4430	0.85	-1.2
5,837,596	-		BT4430	0.89	-1.3
5,837,596	-		BT4430	0.89	-1.1
5,837,605	+		BT4430	0.90	+1.4
5,837,650	-				-0.4
5,837,666	-				-0.4
5,837,726	-				-1.0
5,837,851	+				-1.3
5,837,869	+				-1.2
5,837,913	-				+0.7
5,838,006	-				+0.4
5,838,109	+				+0.8
5,838,119	+				+0.3
5,838,175	-				-1.1
5,838,175	-				+0.1
5,838,246	+		BT4431	0.11	-0.0
5,838,248	+		BT4431	0.11	+1.8
5,838,324	+		BT4431	0.15	-0.1
5,838,374	+		BT4431	0.18	-3.1
5,838,375	-		BT4431	0.18	+0.4
5,838,376	+		BT4431	0.18	-1.4
5,838,376	+		BT4431	0.18	-2.7
5,838,376	+		BT4431	0.18	-3.3
5,838,377	-		BT4431	0.18	-0.8
5,838,379	-		BT4431	0.18	+0.6
5,838,381	-		BT4431	0.18	+0.9
5,838,547	-		BT4431	0.27	+1.4
5,838,635	+		BT4431	0.32	-3.7
5,838,635	+		BT4431	0.32	+1.4
5,838,720	-		BT4431	0.37	+1.9
5,838,745	+		BT4431	0.38	-2.4
5,838,763	+		BT4431	0.39	-3.2
5,838,853	-		BT4431	0.44	+0.5
5,838,971	+		BT4431	0.51	-2.0
5,838,972	-		BT4431	0.51	+4.2
5,839,015	+		BT4431	0.53	-2.9
5,839,015	+		BT4431	0.53	-0.6
5,839,016	-		BT4431	0.53	-1.3
5,839,016	-		BT4431	0.53	-2.5
5,839,116	-		BT4431	0.59	-2.0
5,839,116	-		BT4431	0.59	-1.7
5,839,154	-		BT4431	0.61	-1.4
5,839,154	-		BT4431	0.61	-1.6
5,839,195	-		BT4431	0.63	+0.8
5,839,196	-		BT4431	0.63	+0.4
5,839,209	+		BT4431	0.64	-4.2
5,839,209	+		BT4431	0.64	-2.6
5,839,269	+		BT4431	0.67	-3.1
5,839,493	+		BT4431	0.80	-2.3
5,839,493	+		BT4431	0.80	-1.9
5,839,494	-		BT4431	0.80	-1.0
5,839,497	+		BT4431	0.80	-3.1
5,839,498	-		BT4431	0.80	-1.7
5,839,498	-		BT4431	0.80	+0.2
5,839,498	-		BT4431	0.80	+0.7
5,839,504	-		BT4431	0.81	+1.4
5,839,529	-		BT4431	0.82	-2.3
5,839,624	-		BT4431	0.87	-2.0
5,839,676	-				-0.2
5,839,693	-				-0.6
5,840,133	-		BT4432	0.66	-1.7
5,840,160	-		BT4432	0.73	-0.4
5,840,160	-		BT4432	0.73	-0.4
5,840,222	-		BT4432	0.88	-2.1
5,840,222	-		BT4432	0.88	-0.6
5,840,222	-		BT4432	0.88	-1.1
5,840,265	-				+1.4
5,840,276	-				+1.7
5,840,346	-				+0.2
5,840,426	-				-1.6
5,840,454	-				+0.1
5,840,509	-				-0.6
5,840,650	-				+0.1
5,840,680	-				-0.1
5,840,680	-				-0.9
5,840,683	-				+0.6
5,840,719	-				-0.7