Strain Fitness in Bacteroides thetaiotaomicron VPI-5482 around BT4118

Experiment: BHIS with Fusidic 0.004 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	BHIS with Fusidic 0.004 mg/ml
5,391,385	-				-0.1
5,391,395	-				-3.0
5,391,407	-				-0.9
5,391,509	+				+1.3
5,391,537	-				-1.6
5,391,574	-				-0.8
5,391,676	-		BT4117	0.17	+0.8
5,391,677	+		BT4117	0.17	-1.7
5,391,681	-		BT4117	0.17	-2.2
5,391,683	+		BT4117	0.17	-0.6
5,391,684	-		BT4117	0.18	-1.3
5,391,684	-		BT4117	0.18	-1.0
5,391,705	+		BT4117	0.20	+0.9
5,391,707	+		BT4117	0.21	-0.2
5,391,707	+		BT4117	0.21	-1.2
5,391,728	+		BT4117	0.23	+0.2
5,391,753	+		BT4117	0.26	-0.1
5,391,761	+		BT4117	0.27	-0.3
5,391,910	-		BT4117	0.46	+0.9
5,391,925	-		BT4117	0.48	-1.7
5,392,050	-		BT4117	0.64	+0.4
5,392,128	+		BT4117	0.73	+2.2
5,392,129	-		BT4117	0.74	+0.0
5,392,150	-		BT4117	0.76	+0.2
5,392,150	-		BT4117	0.76	-0.4
5,392,165	-		BT4117	0.78	-0.4
5,392,184	+		BT4117	0.81	+1.6
5,392,184	+		BT4117	0.81	+0.9
5,392,184	+		BT4117	0.81	+2.4
5,392,185	-		BT4117	0.81	-2.1
5,392,185	-		BT4117	0.81	-0.7
5,392,187	-		BT4117	0.81	-2.2
5,392,208	+		BT4117	0.84	+1.9
5,392,215	+		BT4117	0.84	+0.1
5,392,269	+				+2.6
5,392,287	-				-0.3
5,392,289	+				+0.8
5,392,342	-				+1.5
5,392,367	-				-1.8
5,392,440	-		BT4118	0.12	-0.9
5,392,508	+		BT4118	0.20	-1.8
5,392,508	+		BT4118	0.20	-0.8
5,392,538	+		BT4118	0.24	-1.2
5,392,615	+		BT4118	0.34	-1.8
5,392,625	+		BT4118	0.35	+1.8
5,392,665	+		BT4118	0.40	-2.0
5,392,723	+		BT4118	0.47	-0.6
5,392,837	-		BT4118	0.61	+0.4
5,392,892	-		BT4118	0.68	+1.3
5,392,895	+		BT4118	0.68	-1.1
5,392,912	+		BT4118	0.70	-1.7
5,392,912	+		BT4118	0.70	-2.1
5,392,926	+		BT4118	0.72	+0.6
5,392,927	-		BT4118	0.72	-0.1
5,392,967	-		BT4118	0.77	-0.8
5,393,049	-		BT4118	0.87	-1.1
5,393,078	+				-0.8
5,393,079	-				-1.7
5,393,153	-				-0.6
5,393,153	-				-1.3
5,393,159	+				-0.1
5,393,160	-				-1.3
5,393,160	-				+1.5
5,393,241	+				+0.2
5,393,241	+				-0.1
5,393,317	-				-0.7
5,393,317	-				+1.0
5,393,320	+				-0.8
5,393,331	-				+1.2
5,393,398	-				+1.5
5,393,423	+				-0.2
5,393,431	-				-2.7
5,393,431	-				-0.5
5,393,450	+				-2.2
5,393,484	+				+0.2
5,393,577	-				-0.9
5,393,577	-				+0.4
5,393,579	+				-1.8
5,393,580	-				-0.8
5,393,580	-				-2.7
5,393,622	+				+0.3
5,393,668	-				-1.5
5,393,679	+				-1.8
5,393,714	+				+0.5
5,393,720	-				+0.2
5,393,778	+		BT4119	0.10	+0.9
5,393,779	-		BT4119	0.10	-0.7
5,393,779	-		BT4119	0.10	-0.5
5,393,789	+		BT4119	0.11	-0.2
5,393,860	-		BT4119	0.15	-1.5
5,393,889	-		BT4119	0.17	-0.4
5,393,964	+		BT4119	0.21	-1.0
5,394,127	-		BT4119	0.31	-0.9