Strain Fitness in Bacteroides thetaiotaomicron VPI-5482 around BT3915

Experiment: BHIS with Fusidic 0.004 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	BHIS with Fusidic 0.004 mg/ml
5,088,616	-		BT3914	0.38	+0.0
5,088,718	-		BT3914	0.49	+1.2
5,088,718	-		BT3914	0.49	-0.4
5,088,754	-		BT3914	0.53	-0.6
5,088,799	+		BT3914	0.58	+0.1
5,088,808	+		BT3914	0.59	+0.2
5,088,808	+				+1.6
5,088,809	-		BT3914	0.59	+1.4
5,088,814	-		BT3914	0.60	-2.5
5,088,815	+		BT3914	0.60	+0.6
5,088,816	-		BT3914	0.60	-0.3
5,088,837	+		BT3914	0.62	-0.8
5,088,838	-		BT3914	0.62	-0.5
5,088,838	-		BT3914	0.62	+0.0
5,088,893	+		BT3914	0.68	-0.1
5,088,894	-		BT3914	0.68	+0.6
5,088,917	-		BT3914	0.71	-1.5
5,088,934	-		BT3914	0.73	+0.7
5,088,938	-		BT3914	0.73	+0.7
5,088,965	+		BT3914	0.76	-0.9
5,088,970	-		BT3914	0.77	+0.8
5,088,970	-		BT3914	0.77	-0.0
5,089,025	+		BT3914	0.83	+1.6
5,089,172	+				-2.2
5,089,184	+				+0.2
5,089,184	+				-1.1
5,089,185	-				-0.4
5,089,228	+				-0.2
5,089,290	-				-1.1
5,089,291	+				-1.5
5,089,333	-				-0.2
5,089,477	+				-2.6
5,089,483	+				-0.0
5,089,483	+				-0.0
5,089,487	+				+1.8
5,089,635	-		BT3915	0.24	-2.5
5,089,638	-		BT3915	0.26	+1.6
5,089,757	-		BT3915	0.74	-2.1
5,089,813	-				-2.6
5,089,813	-				-0.2
5,089,817	-				-0.1
5,089,817	-				-0.0
5,089,837	-				-0.0
5,089,846	-				-0.7
5,089,934	-				+0.3
5,089,938	-				-1.7
5,090,044	+				+1.4
5,090,057	+		BT3916	0.10	-2.1
5,090,058	-		BT3916	0.10	-1.2
5,090,060	-		BT3916	0.10	+0.4
5,090,098	+		BT3916	0.14	-0.9
5,090,103	-		BT3916	0.15	+0.5
5,090,103	-		BT3916	0.15	-1.6
5,090,103	-		BT3916	0.15	+0.2
5,090,103	-		BT3916	0.15	+1.6
5,090,153	+		BT3916	0.20	-2.1
5,090,154	-		BT3916	0.20	+0.4
5,090,154	-		BT3916	0.20	-0.8
5,090,192	-		BT3916	0.24	+0.1
5,090,196	-		BT3916	0.25	-0.0
5,090,197	+		BT3916	0.25	-0.1
5,090,198	-		BT3916	0.25	-1.7
5,090,277	+		BT3916	0.33	+0.4
5,090,344	+		BT3916	0.40	+1.6
5,090,474	+		BT3916	0.54	-0.0
5,090,586	-		BT3916	0.66	+0.6
5,090,611	+		BT3916	0.68	-2.2
5,090,611	+		BT3916	0.68	+2.6
5,090,770	+		BT3916	0.85	-0.4
5,090,771	-		BT3916	0.85	-1.5
5,090,772	+		BT3916	0.85	-1.0
5,090,773	-		BT3916	0.85	-0.7
5,090,773	-		BT3916	0.85	-0.4
5,090,773	-		BT3916	0.85	-1.4