Strain Fitness in Bacteroides thetaiotaomicron VPI-5482 around BT3385

Experiment: BHIS with Fusidic 0.004 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	BHIS with Fusidic 0.004 mg/ml
4,362,376	+		BT3384	0.42	-2.1
4,362,376	+		BT3384	0.42	-1.4
4,362,376	+		BT3384	0.42	-1.0
4,362,376	+		BT3384	0.42	-0.7
4,362,376	+		BT3384	0.42	-0.3
4,362,376	+		BT3384	0.42	-2.2
4,362,377	-		BT3384	0.42	+0.4
4,362,461	-		BT3384	0.56	+0.2
4,362,479	-		BT3384	0.58	-0.1
4,362,515	-		BT3384	0.64	-1.1
4,362,566	-		BT3384	0.73	-1.2
4,362,597	+		BT3384	0.78	-1.6
4,362,708	+				-0.6
4,362,709	-				+0.2
4,362,735	+				-1.7
4,362,746	+				-1.4
4,362,747	-				+3.6
4,362,757	+				+0.2
4,362,760	-				-1.2
4,362,760	-				-1.6
4,362,760	-				-0.3
4,362,762	-				-1.2
4,362,762	-				-0.8
4,362,774	-				-0.0
4,362,813	+				+1.1
4,362,869	+				+1.3
4,362,869	+				-0.9
4,362,869	+				-0.0
4,362,877	+				+0.6
4,362,878	-				+1.7
4,362,878	-				-2.2
4,362,910	+				-0.6
4,362,911	-				+1.7
4,362,965	+				-0.3
4,362,966	-				-1.8
4,363,011	-				-0.6
4,363,035	+				+0.1
4,363,178	-				+0.2
4,363,178	-				-0.5
4,363,225	-				+1.6
4,363,308	-				-0.8
4,363,327	+				-0.1
4,363,327	+				-1.1
4,363,327	+				-0.8
4,363,328	-				+0.9
4,363,331	+				+1.0
4,363,331	+				-0.6
4,363,331	+				+0.0
4,363,339	+				+0.9
4,363,380	+				+0.7
4,363,420	+				-2.0
4,363,443	+				-0.7
4,363,465	+				-2.5
4,363,484	-				+0.7
4,363,532	+				-1.6
4,363,535	-				+0.7
4,363,537	-				+0.2
4,363,607	+		BT3385	0.11	-0.7
4,363,608	-		BT3385	0.11	+0.3
4,363,608	-		BT3385	0.11	-0.5
4,363,651	+		BT3385	0.13	+1.5
4,363,652	-		BT3385	0.13	-1.4
4,363,700	+		BT3385	0.16	+0.4
4,363,700	+		BT3385	0.16	-1.3
4,363,700	+		BT3385	0.16	+0.4
4,363,754	-		BT3385	0.18	+1.7
4,363,754	-		BT3385	0.18	+0.5
4,363,836	-		BT3385	0.22	-2.7
4,363,870	-		BT3385	0.24	+0.3
4,363,949	+		BT3385	0.28	+0.3
4,364,048	-		BT3385	0.32	+0.8
4,364,051	+		BT3385	0.32	+1.2
4,364,134	-		BT3385	0.36	+0.7
4,364,222	-		BT3385	0.41	+1.3
4,364,270	+		BT3385	0.43	+0.2
4,364,270	+		BT3385	0.43	-0.4
4,364,271	-		BT3385	0.43	-0.2
4,364,275	+		BT3385	0.43	+0.5
4,364,378	-		BT3385	0.48	-0.8
4,364,461	+		BT3385	0.52	-0.1
4,364,465	-		BT3385	0.52	+0.3
4,364,570	+		BT3385	0.57	+1.7
4,364,570	+		BT3385	0.57	-1.4
4,364,635	+		BT3385	0.60	+0.7
4,364,636	-		BT3385	0.60	+0.2
4,364,731	+		BT3385	0.65	-0.7
4,364,732	-		BT3385	0.65	-0.3
4,364,759	-		BT3385	0.66	-1.4
4,364,759	-		BT3385	0.66	+0.0
4,364,809	+		BT3385	0.69	-1.3
4,364,810	-		BT3385	0.69	-0.6
4,364,852	+		BT3385	0.71	+0.2
4,364,898	+		BT3385	0.73	-1.0
4,364,899	-		BT3385	0.73	-2.0
4,364,899	-		BT3385	0.73	+0.9
4,364,950	+		BT3385	0.75	+1.7
4,364,950	+		BT3385	0.75	+0.7
4,365,008	-		BT3385	0.78	+0.5
4,365,019	+		BT3385	0.79	-0.8
4,365,025	+		BT3385	0.79	+0.6
4,365,150	-		BT3385	0.85	-0.0
4,365,191	-		BT3385	0.87	+0.4
4,365,193	+		BT3385	0.87	+0.4
4,365,254	+		BT3385	0.90	+0.5
4,365,254	+		BT3385	0.90	-1.4
4,365,335	-				-1.4
4,365,335	-				+0.0
4,365,361	-				+0.2
4,365,365	+				-3.5
4,365,377	-				+0.2
4,365,429	-				-2.0
4,365,455	-				-0.0
4,365,461	+				-1.8
4,365,506	-				-2.0
4,365,511	-				-0.0
4,365,511	-				-1.2
4,365,527	+				-1.1