Strain Fitness in Bacteroides thetaiotaomicron VPI-5482 around BT3269

Experiment: BHIS with Fusidic 0.004 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	BHIS with Fusidic 0.004 mg/ml
4,173,684	-				-1.2
4,173,684	-				-0.2
4,173,712	-				+2.0
4,173,712	-				+0.4
4,173,712	-				-1.4
4,173,912	-				-0.3
4,173,933	+				+0.2
4,173,933	+				-0.4
4,173,934	-				+0.8
4,174,036	-				-0.1
4,174,140	+				-0.5
4,174,140	+				-1.8
4,174,169	-				+0.4
4,174,185	-				+0.8
4,174,196	+				-1.9
4,174,196	+				-0.4
4,174,197	-				-1.0
4,174,211	-				+0.1
4,174,235	-				+2.8
4,174,238	-				+0.5
4,174,238	-				+0.8
4,174,244	+				-1.8
4,174,244	+				+0.9
4,174,251	-				-1.8
4,174,360	-				+0.1
4,174,390	-				-1.8
4,174,395	-				-0.6
4,174,417	+				-0.3
4,174,434	+				-0.1
4,174,435	-				+0.4
4,174,435	-				-1.7
4,174,454	-				-2.0
4,174,456	-				-0.1
4,174,468	+				-3.2
4,174,513	-				-1.0
4,174,523	+				-2.5
4,174,616	+		BT3269	0.14	-1.8
4,174,617	-		BT3269	0.14	-1.8
4,174,617	-		BT3269	0.14	+0.9
4,174,696	+		BT3269	0.28	-1.7
4,174,697	-		BT3269	0.28	-0.3
4,174,698	+		BT3269	0.28	-0.5
4,174,698	+		BT3269	0.28	+0.8
4,174,714	+		BT3269	0.31	-1.3
4,174,715	-		BT3269	0.31	-1.9
4,174,751	+		BT3269	0.37	+1.8
4,174,770	-		BT3269	0.40	+1.8
4,174,787	+		BT3269	0.43	-4.6
4,174,788	-		BT3269	0.44	+0.8
4,174,819	-		BT3269	0.49	-1.7
4,174,868	+		BT3269	0.58	-2.1
4,174,908	-		BT3269	0.65	-1.0
4,174,908	-		BT3269	0.65	+0.2
4,174,914	-		BT3269	0.66	+0.2
4,174,914	-		BT3269	0.66	-0.4
4,174,915	+		BT3269	0.66	-1.3
4,175,015	-		BT3269	0.83	-1.4
4,175,015	-		BT3269	0.83	-2.1
4,175,044	+		BT3269	0.88	-2.0
4,175,078	+				-2.7
4,175,199	-				-0.2
4,175,225	+				-1.9
4,175,226	-				+0.5
4,175,231	-				+1.8
4,175,231	-				+0.3
4,175,233	-				+0.7
4,175,233	-				-0.5
4,175,233	-				+0.7
4,175,281	+				-2.2
4,175,282	-				+0.4
4,175,390	-				-1.0
4,175,398	+				+0.5
4,175,398	+				-1.7
4,175,410	-				+1.8
4,175,571	+				+1.8
4,175,572	-				-0.4
4,175,582	-				-3.0
4,175,615	+				-2.1
4,175,727	-				+0.2
4,175,730	+				-1.4
4,175,797	-		BT3270	0.14	-0.2
4,175,909	-		BT3270	0.23	-3.4
4,175,954	-		BT3270	0.27	-1.3
4,176,086	+		BT3270	0.38	-1.5
4,176,092	+		BT3270	0.39	-3.0