Strain Fitness in Bacteroides thetaiotaomicron VPI-5482 around BT3264

Experiment: BHIS with Fusidic 0.004 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	BHIS with Fusidic 0.004 mg/ml
4,166,978	-				-1.6
4,166,978	-				+0.4
4,166,981	+				-0.7
4,166,995	-				+0.5
4,167,000	-				-1.9
4,167,055	+				-2.0
4,167,055	+				+1.8
4,167,071	+				-0.2
4,167,072	-				-0.1
4,167,072	-				-0.0
4,167,108	-				-0.4
4,167,198	-		BT3263	0.13	-1.6
4,167,202	+		BT3263	0.14	+0.4
4,167,203	-		BT3263	0.14	-1.0
4,167,280	+		BT3263	0.22	+0.5
4,167,384	+		BT3263	0.34	-0.2
4,167,385	-		BT3263	0.34	-0.5
4,167,441	+		BT3263	0.40	-2.8
4,167,474	+		BT3263	0.44	-1.3
4,167,537	-		BT3263	0.51	+0.1
4,167,542	+		BT3263	0.51	-1.0
4,167,542	+		BT3263	0.51	+0.8
4,167,542	+		BT3263	0.51	-0.2
4,167,542	+		BT3263	0.51	-0.1
4,167,542	+		BT3263	0.51	-0.0
4,167,542	+		BT3263	0.51	-1.6
4,167,543	-		BT3263	0.51	+1.0
4,167,547	-		BT3263	0.52	+0.0
4,167,644	+		BT3263	0.63	+0.8
4,167,645	-		BT3263	0.63	-1.5
4,167,668	+		BT3263	0.65	+0.2
4,167,668	+		BT3263	0.65	-2.0
4,167,669	-		BT3263	0.65	-0.8
4,167,700	-		BT3263	0.69	-0.4
4,167,900	+				+0.1
4,167,926	+				+0.2
4,167,926	+				+0.1
4,167,928	+				+0.4
4,167,949	+				-0.5
4,167,950	-				+0.6
4,168,005	+		BT3264	0.11	-1.3
4,168,006	-		BT3264	0.12	-1.5
4,168,014	+		BT3264	0.14	-1.9
4,168,090	-		BT3264	0.36	-1.1
4,168,105	+		BT3264	0.41	-2.7
4,168,117	+		BT3264	0.44	+1.0
4,168,216	+		BT3264	0.73	-0.5
4,168,277	-				+1.8
4,168,305	+				-2.2
4,168,306	-				-0.4
4,168,330	-				-0.4
4,168,396	-				+0.8
4,168,417	+				+0.2
4,168,417	+				-1.9
4,168,417	+				+0.9
4,168,418	-				+0.8
4,168,423	+				+0.8
4,168,423	+				-0.5
4,168,423	+				-1.5
4,168,423	+				+0.1
4,168,427	-				-1.6
4,168,427	-				-0.5
4,168,530	+		BT3265	0.30	+0.3
4,168,544	+		BT3265	0.33	-0.6
4,168,665	-		BT3265	0.60	-1.0
4,168,698	-		BT3265	0.67	+0.8
4,168,721	+		BT3265	0.72	+2.6
4,168,721	+		BT3265	0.72	-1.5
4,168,723	+		BT3265	0.73	+1.0
4,168,724	-		BT3265	0.73	+0.8
4,168,757	+		BT3265	0.80	-0.2
4,168,808	+				-1.2
4,168,823	+				-0.2
4,168,832	+				-0.4
4,168,832	+				-1.9
4,168,838	+				-1.5
4,168,838	+				+0.7
4,168,859	+				-1.0
4,168,874	+				-0.9
4,168,874	+				+0.4
4,168,932	-				-0.8
4,168,941	-				+0.2
4,168,944	+				-2.4
4,168,948	-				+0.4
4,168,951	+				-1.4
4,168,959	-				-0.5
4,169,009	+				-1.8
4,169,009	+				+0.2
4,169,009	+				-0.5
4,169,010	-				-0.2
4,169,013	+				-1.9
4,169,014	-				-0.0
4,169,014	-				-2.4
4,169,016	+				-0.4
4,169,030	+				-0.7
4,169,030	+				+1.4
4,169,030	+				-2.0
4,169,031	-				+0.2
4,169,031	-				+0.8
4,169,072	-				-1.4
4,169,083	+				-0.5
4,169,084	-				-1.4
4,169,084	-				-2.0
4,169,137	+				-0.2
4,169,137	+				+0.0
4,169,145	+				+1.8
4,169,289	-				-0.6