Strain Fitness in Bacteroides thetaiotaomicron VPI-5482 around BT2780

Experiment: BHIS with Fusidic 0.004 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	BHIS with Fusidic 0.004 mg/ml
3,446,308	+				-0.3
3,446,309	-				-0.3
3,446,309	-				+1.7
3,446,309	-				+0.1
3,446,357	+				-0.1
3,446,358	-				-0.4
3,446,361	-				+0.7
3,446,362	+				+0.7
3,446,381	+		BT2779	0.11	+1.7
3,446,406	+		BT2779	0.14	-1.3
3,446,458	-		BT2779	0.21	+0.1
3,446,560	+		BT2779	0.34	+1.0
3,446,568	+		BT2779	0.35	+0.5
3,446,616	+		BT2779	0.41	-1.4
3,446,617	-		BT2779	0.42	+0.5
3,446,619	+		BT2779	0.42	+0.2
3,446,620	-		BT2779	0.42	+0.5
3,446,620	-		BT2779	0.42	-0.6
3,446,755	+		BT2779	0.59	-0.9
3,446,755	+		BT2779	0.59	-1.1
3,446,781	+		BT2779	0.63	+0.9
3,446,781	+		BT2779	0.63	-3.1
3,446,782	-		BT2779	0.63	-1.1
3,446,791	+		BT2779	0.64	-0.4
3,446,792	-		BT2779	0.64	+0.4
3,446,792	-		BT2779	0.64	-1.1
3,446,798	+		BT2779	0.65	+0.4
3,446,809	-		BT2779	0.66	-0.2
3,446,850	+		BT2779	0.72	+0.1
3,446,854	-		BT2779	0.72	-0.7
3,446,902	-		BT2779	0.78	-2.0
3,446,937	+		BT2779	0.83	+0.9
3,446,937	+		BT2779	0.83	-0.2
3,446,965	+		BT2779	0.86	-0.3
3,446,966	-		BT2779	0.86	-0.1
3,447,010	+				+1.2
3,447,010	+				-2.6
3,447,010	+				-1.1
3,447,011	-				+1.1
3,447,031	-				-2.0
3,447,031	-				-0.3
3,447,065	-				+1.0
3,447,093	+				-2.4
3,447,094	-				+0.7
3,447,108	+				-0.4
3,447,126	-				-0.6
3,447,142	+				+0.6
3,447,151	+				-0.2
3,447,183	+				-0.8
3,447,244	-				-1.8
3,447,278	+				+0.7
3,447,298	-				-1.4
3,447,300	+				-0.6
3,447,300	+				-0.3
3,447,301	-				-0.5
3,447,308	+				+0.4
3,447,310	+				-0.5
3,447,327	-				-1.7
3,447,351	+				-0.3
3,447,358	-				-0.0
3,447,408	+		BT2780	0.12	-0.9
3,447,409	-		BT2780	0.12	+1.7
3,447,419	+		BT2780	0.12	-2.0
3,447,423	+		BT2780	0.13	-0.1
3,447,449	+		BT2780	0.15	+1.7
3,447,450	-		BT2780	0.15	-0.3
3,447,476	-		BT2780	0.17	+0.7
3,447,582	-		BT2780	0.26	-1.0
3,447,582	-		BT2780	0.26	-0.8
3,447,600	+		BT2780	0.28	+1.7
3,447,629	+		BT2780	0.30	+0.1
3,447,635	+		BT2780	0.31	-0.5
3,447,655	+		BT2780	0.32	+0.3
3,447,655	+		BT2780	0.32	-2.4
3,447,656	-		BT2780	0.32	+0.5
3,447,659	+		BT2780	0.33	+1.5
3,447,719	+		BT2780	0.38	+0.5
3,447,730	-		BT2780	0.39	+1.4
3,447,760	-		BT2780	0.41	+0.6
3,447,772	+		BT2780	0.42	+0.7
3,447,780	+		BT2780	0.43	-0.3
3,447,803	-		BT2780	0.45	+0.7
3,447,812	+		BT2780	0.46	-0.4
3,447,902	+		BT2780	0.53	+1.7
3,447,919	-		BT2780	0.55	-0.6
3,447,944	+		BT2780	0.57	-1.6
3,447,944	+		BT2780	0.57	+0.9
3,447,945	-		BT2780	0.57	-0.9
3,447,948	+		BT2780	0.57	-1.4
3,447,948	+		BT2780	0.57	+0.3
3,447,949	-		BT2780	0.57	-0.7
3,447,954	-		BT2780	0.57	-1.0
3,448,008	+		BT2780	0.62	-1.8
3,448,058	+		BT2780	0.66	-1.3
3,448,062	+		BT2780	0.67	+2.4
3,448,062	+		BT2780	0.67	-1.6
3,448,065	-		BT2780	0.67	-2.4
3,448,077	+		BT2780	0.68	+0.9
3,448,078	-		BT2780	0.68	-2.4
3,448,100	+		BT2780	0.70	+0.1
3,448,115	+		BT2780	0.71	-0.9
3,448,134	+		BT2780	0.73	+0.5
3,448,134	+		BT2780	0.73	+0.9
3,448,144	-		BT2780	0.73	+0.6
3,448,165	-		BT2780	0.75	+0.7
3,448,165	-		BT2780	0.75	+1.0
3,448,170	-		BT2780	0.76	+0.7
3,448,170	-		BT2780	0.76	-0.7
3,448,181	-		BT2780	0.77	-1.2
3,448,246	+		BT2780	0.82	+0.7
3,448,246	+		BT2780	0.82	+0.7
3,448,311	+		BT2780	0.88	-1.5
3,448,311	+		BT2780	0.88	+1.5
3,448,312	-		BT2780	0.88	+0.0
3,448,312	-		BT2780	0.88	-0.6
3,448,335	+		BT2780	0.90	-2.0
3,448,343	+				-0.7
3,448,359	-				+0.1
3,448,359	-				-2.7
3,448,409	+				-1.6
3,448,409	+				+0.7
3,448,410	-				-2.2
3,448,445	+				+1.3
3,448,445	+				-1.1
3,448,446	-				-1.4
3,448,456	+				-0.4
3,448,456	+				-1.1
3,448,457	-				+2.0
3,448,534	+				-0.8
3,448,535	-				+0.6
3,448,535	-				+1.1
3,448,535	-				-0.4
3,448,581	-				+1.7
3,448,591	-				-2.8
3,448,595	+				-2.2
3,448,596	-				+0.1
3,448,784	-				-1.1
3,448,784	-				-0.2
3,448,842	+				-0.3
3,448,889	+				-2.1
3,448,908	-				-0.5
3,449,367	+		BT2781	0.44	-0.6