Strain Fitness in Bacteroides thetaiotaomicron VPI-5482 around BT1647

Experiment: BHIS with Fusidic 0.004 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	BHIS with Fusidic 0.004 mg/ml
2,035,469	+				-1.0
2,035,538	+				-2.5
2,035,556	+				+1.0
2,035,592	+				+0.0
2,035,599	+				-1.4
2,035,637	+		BT1646	0.13	-0.8
2,035,687	+		BT1646	0.19	+0.0
2,035,828	+		BT1646	0.34	+0.8
2,035,829	-		BT1646	0.35	+2.7
2,035,829	-		BT1646	0.35	+2.6
2,035,832	+		BT1646	0.35	-0.1
2,035,874	+		BT1646	0.39	-1.0
2,035,885	-		BT1646	0.41	-0.3
2,035,886	+		BT1646	0.41	+0.9
2,035,930	+		BT1646	0.46	+0.3
2,035,930	+		BT1646	0.46	-1.2
2,035,930	+		BT1646	0.46	+0.6
2,035,931	-		BT1646	0.46	+1.5
2,035,957	-		BT1646	0.49	+2.0
2,036,030	+		BT1646	0.57	+0.6
2,036,093	+		BT1646	0.63	-0.6
2,036,122	+		BT1646	0.67	-0.3
2,036,152	+		BT1646	0.70	+2.1
2,036,177	-		BT1646	0.73	-0.3
2,036,178	+		BT1646	0.73	-2.3
2,036,233	+		BT1646	0.79	+0.4
2,036,244	+		BT1646	0.80	-0.9
2,036,244	+		BT1646	0.80	-0.6
2,036,257	+		BT1646	0.81	-1.8
2,036,289	+		BT1646	0.85	-0.8
2,036,341	+				+0.7
2,036,343	+				-0.2
2,036,343	+				+1.1
2,036,344	-				+3.3
2,036,428	+				-0.4
2,036,563	+		BT1647	0.11	+1.0
2,036,583	+		BT1647	0.12	+0.8
2,036,583	+		BT1647	0.12	+1.4
2,036,631	+		BT1647	0.16	+1.2
2,036,631	+		BT1647	0.16	-0.4
2,036,636	-		BT1647	0.16	-0.7
2,036,652	+		BT1647	0.18	+0.5
2,036,660	-		BT1647	0.18	+2.9
2,036,661	+		BT1647	0.18	+0.0
2,036,661	+		BT1647	0.18	+0.6
2,036,664	-		BT1647	0.19	-1.4
2,036,710	+		BT1647	0.22	-0.6
2,036,710	+		BT1647	0.22	+1.4
2,036,734	+		BT1647	0.24	+0.4
2,036,776	+		BT1647	0.27	-0.8
2,036,842	-		BT1647	0.32	+1.7
2,036,844	-		BT1647	0.32	+0.8
2,036,894	-		BT1647	0.36	+0.5
2,036,925	-		BT1647	0.39	-0.6
2,036,959	+		BT1647	0.41	-0.7
2,036,995	+		BT1647	0.44	+0.9
2,037,082	+		BT1647	0.51	+1.4
2,037,087	+		BT1647	0.51	-0.6
2,037,129	-		BT1647	0.54	-0.2
2,037,151	+		BT1647	0.56	-1.2
2,037,151	+		BT1647	0.56	-1.0
2,037,151	+		BT1647	0.56	-0.2
2,037,152	-		BT1647	0.56	-1.1
2,037,153	+		BT1647	0.56	-0.9
2,037,153	+		BT1647	0.56	-1.0
2,037,184	+		BT1647	0.59	-2.1
2,037,184	+		BT1647	0.59	-0.2
2,037,202	+		BT1647	0.60	+0.0
2,037,211	+		BT1647	0.61	+1.3
2,037,283	+		BT1647	0.66	-1.3
2,037,285	+		BT1647	0.66	-0.9
2,037,291	+		BT1647	0.67	-0.1
2,037,291	+		BT1647	0.67	-1.2
2,037,292	-		BT1647	0.67	+0.6
2,037,309	+		BT1647	0.68	-1.0
2,037,310	-		BT1647	0.68	+2.0
2,037,336	+		BT1647	0.70	-0.8
2,037,360	+		BT1647	0.72	-0.4
2,037,362	+		BT1647	0.72	+1.0
2,037,384	-		BT1647	0.74	+2.6
2,037,387	+		BT1647	0.74	-0.3
2,037,438	+		BT1647	0.78	-3.0
2,037,439	-		BT1647	0.78	+2.1
2,037,476	+		BT1647	0.81	+0.9
2,037,493	+		BT1647	0.82	+0.2
2,037,494	-		BT1647	0.83	+0.1
2,037,495	+		BT1647	0.83	-0.7
2,037,560	+		BT1647	0.88	+0.1
2,037,560	+		BT1647	0.88	-0.8
2,037,642	-				+1.2
2,037,701	-				-0.0
2,037,705	+				-1.1
2,037,740	+				+2.7
2,037,740	+				-0.1
2,037,853	+		BT1648	0.14	-0.1
2,037,900	+		BT1648	0.19	+1.5
2,038,036	+		BT1648	0.33	+0.0
2,038,040	+		BT1648	0.33	+0.4
2,038,040	+		BT1648	0.33	-0.4
2,038,040	+		BT1648	0.33	-0.7
2,038,040	+		BT1648	0.33	-1.5
2,038,042	+		BT1648	0.33	+0.1
2,038,066	+		BT1648	0.36	-0.1
2,038,067	-		BT1648	0.36	+0.5
2,038,095	+		BT1648	0.39	-1.7
2,038,116	+		BT1648	0.41	-2.6
2,038,128	-		BT1648	0.42	-2.0
2,038,130	+		BT1648	0.42	-0.9
2,038,131	-		BT1648	0.42	+2.3
2,038,135	-		BT1648	0.43	+2.6
2,038,154	+		BT1648	0.45	-1.2
2,038,170	+		BT1648	0.46	-0.8
2,038,227	+		BT1648	0.52	+0.4
2,038,228	-		BT1648	0.52	-1.2
2,038,279	-		BT1648	0.57	+2.6
2,038,291	-		BT1648	0.58	-1.6
2,038,332	+		BT1648	0.63	-1.8
2,038,362	+		BT1648	0.66	-0.9
2,038,383	-		BT1648	0.68	+2.1
2,038,406	+		BT1648	0.70	+0.9
2,038,414	+		BT1648	0.71	-2.0
2,038,416	+		BT1648	0.71	+0.9
2,038,421	+		BT1648	0.72	-0.8
2,038,421	+		BT1648	0.72	-0.1
2,038,423	+		BT1648	0.72	-0.2
2,038,533	+		BT1648	0.83	-1.8
2,038,626	+				+1.0
2,038,626	+				-1.1
2,038,627	-				+3.7
2,038,640	+				+0.6
2,038,643	-				-1.2
2,038,656	-				+3.8