Strain Fitness in Bacteroides thetaiotaomicron VPI-5482 around BT1069

Experiment: BHIS with Fusidic 0.004 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	BHIS with Fusidic 0.004 mg/ml
1,356,059	-				-2.7
1,356,059	-				-1.5
1,356,279	-		BT1068	0.57	-0.6
1,356,329	+		BT1068	0.71	-0.2
1,356,333	-		BT1068	0.72	-3.3
1,356,364	-		BT1068	0.81	-1.0
1,356,366	+		BT1068	0.82	-0.8
1,356,369	-		BT1068	0.83	-2.3
1,356,443	+				+0.5
1,356,471	+				-0.9
1,356,706	+				+0.1
1,356,758	+				+0.8
1,356,759	-				-1.9
1,356,763	+				-0.7
1,356,763	+				-0.5
1,356,763	+				-0.6
1,356,965	+		BT1069	0.33	-0.9
1,356,991	+		BT1069	0.37	-2.7
1,357,024	+		BT1069	0.43	-0.3
1,357,121	-		BT1069	0.61	-3.3
1,357,121	-		BT1069	0.61	-2.1
1,357,149	+		BT1069	0.66	-2.6
1,357,149	+				+0.3
1,357,150	-		BT1069	0.67	-0.7
1,357,154	-		BT1069	0.67	-1.1
1,357,192	+		BT1069	0.74	-2.2
1,357,271	+		BT1069	0.89	-1.4
1,357,272	-		BT1069	0.89	-2.3
1,357,337	-				-0.6
1,357,345	-				-0.5
1,357,345	-				+0.5
1,357,407	-				+0.7
1,357,440	+				-1.1
1,357,446	+				-2.9
1,357,447	-				+1.3
1,357,499	+		BT1070	0.13	-2.1
1,357,524	-		BT1070	0.15	-2.8
1,357,683	+		BT1070	0.27	-0.3
1,357,702	-		BT1070	0.29	-1.8
1,357,770	-		BT1070	0.34	-1.8
1,357,770	-		BT1070	0.34	-0.9
1,357,770	-		BT1070	0.34	-2.3
1,357,920	-		BT1070	0.45	-3.0
1,357,931	+		BT1070	0.46	-1.7
1,357,943	+		BT1070	0.47	-2.9
1,358,048	+		BT1070	0.55	-1.1
1,358,052	+		BT1070	0.56	-0.8
1,358,057	+		BT1070	0.56	-1.1
1,358,057	+		BT1070	0.56	-1.5
1,358,085	+		BT1070	0.58	-1.0
1,358,328	+		BT1070	0.77	-2.3