Strain Fitness in Pseudomonas fluorescens SBW25-INTG around PFLU_RS13430

Experiment: no extra (N); with MOPS

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	no extra (N); with MOPS
3,032,728	+		PFLU_RS13425	0.30	-2.1
3,032,729	-		PFLU_RS13425	0.30	+0.4
3,032,824	+		PFLU_RS13425	0.37	-0.2
3,033,129	+		PFLU_RS13425	0.60	-1.1
3,033,129	+		PFLU_RS13425	0.60	+3.2
3,033,130	-		PFLU_RS13425	0.60	+0.5
3,033,130	-		PFLU_RS13425	0.60	+1.3
3,033,130	-		PFLU_RS13425	0.60	+1.1
3,033,376	+		PFLU_RS13425	0.79	-0.1
3,033,376	+		PFLU_RS13425	0.79	+0.3
3,033,376	+		PFLU_RS13425	0.79	+0.3
3,033,376	+		PFLU_RS13425	0.79	+0.4
3,033,376	+		PFLU_RS13425	0.79	-0.1
3,033,376	+		PFLU_RS13425	0.79	-2.1
3,033,376	+		PFLU_RS13425	0.79	+1.4
3,033,377	-		PFLU_RS13425	0.79	+1.5
3,033,377	-		PFLU_RS13425	0.79	-0.2
3,033,377	-		PFLU_RS13425	0.79	-0.7
3,033,377	-		PFLU_RS13425	0.79	+0.0
3,033,662	+				-0.7
3,033,942	-				-1.0
3,033,942	-				+0.4
3,033,942	-				+1.3
3,033,942	-				-0.4
3,034,026	+		PFLU_RS13430	0.12	+2.1
3,034,026	+		PFLU_RS13430	0.12	+0.6
3,034,027	-		PFLU_RS13430	0.12	-3.2
3,034,027	-		PFLU_RS13430	0.12	+1.1
3,034,027	-		PFLU_RS13430	0.12	-1.9
3,034,027	-		PFLU_RS13430	0.12	+0.6
3,034,082	+		PFLU_RS13430	0.14	-1.3
3,034,082	+		PFLU_RS13430	0.14	-0.1
3,034,082	+		PFLU_RS13430	0.14	+0.1
3,034,082	+		PFLU_RS13430	0.14	+1.1
3,034,083	-		PFLU_RS13430	0.14	+0.2
3,034,083	-		PFLU_RS13430	0.14	-2.4
3,034,362	+		PFLU_RS13430	0.23	+0.5
3,034,363	-		PFLU_RS13430	0.23	+2.6
3,034,384	-		PFLU_RS13430	0.24	-0.5
3,034,384	-		PFLU_RS13430	0.24	+0.4
3,034,409	+		PFLU_RS13430	0.25	-0.4
3,034,410	-		PFLU_RS13430	0.25	+0.3
3,034,538	+		PFLU_RS13430	0.29	-2.1
3,034,539	-		PFLU_RS13430	0.29	-0.7
3,034,539	-		PFLU_RS13430	0.29	-0.1
3,034,559	+		PFLU_RS13430	0.30	+0.3
3,034,559	+		PFLU_RS13430	0.30	-0.7
3,034,559	+		PFLU_RS13430	0.30	-0.1
3,034,560	-		PFLU_RS13430	0.30	-0.1
3,034,634	-		PFLU_RS13430	0.32	+1.1
3,034,773	+		PFLU_RS13430	0.36	+0.9
3,034,773	+		PFLU_RS13430	0.36	+1.5
3,034,773	+		PFLU_RS13430	0.36	-0.1
3,034,773	+		PFLU_RS13430	0.36	+0.2
3,034,774	-		PFLU_RS13430	0.36	+0.0
3,034,774	-		PFLU_RS13430	0.36	+0.1
3,034,774	-		PFLU_RS13430	0.36	+0.4
3,034,774	-		PFLU_RS13430	0.36	+0.6
3,034,774	-		PFLU_RS13430	0.36	-0.7
3,034,774	-		PFLU_RS13430	0.36	+0.3
3,034,774	-		PFLU_RS13430	0.36	+2.5
3,034,879	-		PFLU_RS13430	0.40	-0.6
3,035,148	+		PFLU_RS13430	0.49	+1.1
3,035,148	+		PFLU_RS13430	0.49	+0.6
3,035,149	-		PFLU_RS13430	0.49	+0.8
3,035,149	-		PFLU_RS13430	0.49	-0.2
3,035,269	+		PFLU_RS13430	0.52	-0.3
3,035,269	+		PFLU_RS13430	0.52	-0.6
3,035,269	+		PFLU_RS13430	0.52	-0.1
3,035,270	-		PFLU_RS13430	0.52	-1.3
3,035,270	-		PFLU_RS13430	0.52	+0.0
3,035,270	-		PFLU_RS13430	0.52	+0.5
3,035,270	-		PFLU_RS13430	0.52	-1.0
3,035,278	-		PFLU_RS13430	0.53	+0.7
3,035,439	+		PFLU_RS13430	0.58	-0.7
3,035,439	+		PFLU_RS13430	0.58	-0.7
3,035,439	+		PFLU_RS13430	0.58	-0.7
3,035,439	+		PFLU_RS13430	0.58	-0.4
3,035,439	+		PFLU_RS13430	0.58	-1.1
3,035,439	+		PFLU_RS13430	0.58	-0.8
3,035,439	+		PFLU_RS13430	0.58	-1.4
3,035,439	+		PFLU_RS13430	0.58	-2.4
3,035,439	+		PFLU_RS13430	0.58	-0.1
3,035,439	+		PFLU_RS13430	0.58	+1.9
3,035,439	+		PFLU_RS13430	0.58	+0.1
3,035,439	+		PFLU_RS13430	0.58	-2.3
3,035,440	-		PFLU_RS13430	0.58	+0.3
3,035,440	-		PFLU_RS13430	0.58	+0.1
3,035,440	-		PFLU_RS13430	0.58	-1.7
3,035,440	-		PFLU_RS13430	0.58	+0.3
3,035,440	-		PFLU_RS13430	0.58	+0.3
3,035,441	+		PFLU_RS13430	0.58	-0.1
3,035,442	-		PFLU_RS13430	0.58	-0.5
3,035,442	-		PFLU_RS13430	0.58	+0.3
3,035,442	-		PFLU_RS13430	0.58	+1.3
3,035,442	-		PFLU_RS13430	0.58	+1.2
3,035,442	-		PFLU_RS13430	0.58	-0.3
3,035,640	+		PFLU_RS13430	0.64	+0.2
3,035,640	+		PFLU_RS13430	0.64	+0.4
3,035,640	+		PFLU_RS13430	0.64	+0.2
3,035,772	+		PFLU_RS13430	0.69	+0.1
3,035,772	+		PFLU_RS13430	0.69	+0.9
3,035,772	+		PFLU_RS13430	0.69	-0.7
3,035,773	-		PFLU_RS13430	0.69	-0.8
3,035,773	-		PFLU_RS13430	0.69	+1.1
3,035,773	-		PFLU_RS13430	0.69	-0.4
3,035,773	-		PFLU_RS13430	0.69	-0.3
3,035,773	-		PFLU_RS13430	0.69	+1.2
3,035,773	-		PFLU_RS13430	0.69	+1.1
3,035,819	-		PFLU_RS13430	0.70	-1.8
3,035,841	+		PFLU_RS13430	0.71	-2.0
3,035,841	+		PFLU_RS13430	0.71	+2.5
3,035,841	+		PFLU_RS13430	0.71	+1.2
3,035,842	-		PFLU_RS13430	0.71	-0.4
3,035,877	+		PFLU_RS13430	0.72	+1.9
3,035,877	+		PFLU_RS13430	0.72	-1.7
3,035,877	+		PFLU_RS13430	0.72	-0.1
3,035,877	+		PFLU_RS13430	0.72	-1.3
3,035,877	+		PFLU_RS13430	0.72	+0.1
3,035,877	+		PFLU_RS13430	0.72	+0.1
3,035,877	+		PFLU_RS13430	0.72	+2.3
3,035,877	+		PFLU_RS13430	0.72	-2.4
3,035,877	+		PFLU_RS13430	0.72	+1.3
3,035,877	+		PFLU_RS13430	0.72	+0.9
3,035,877	+		PFLU_RS13430	0.72	+0.6
3,035,878	-		PFLU_RS13430	0.72	+2.5
3,035,878	-		PFLU_RS13430	0.72	-0.7
3,035,878	-		PFLU_RS13430	0.72	-0.4
3,035,878	-		PFLU_RS13430	0.72	+1.6
3,035,878	-		PFLU_RS13430	0.72	+2.1
3,035,895	+		PFLU_RS13430	0.73	-0.1
3,035,906	-		PFLU_RS13430	0.73	-0.4
3,035,906	-		PFLU_RS13430	0.73	+0.3
3,035,906	-		PFLU_RS13430	0.73	-0.5
3,036,249	+		PFLU_RS13430	0.84	+2.5
3,036,249	+		PFLU_RS13430	0.84	-2.7
3,036,249	+		PFLU_RS13430	0.84	+0.3
3,036,249	+		PFLU_RS13430	0.84	-1.3
3,036,249	+		PFLU_RS13430	0.84	+0.4
3,036,249	+		PFLU_RS13430	0.84	+0.5
3,036,249	+		PFLU_RS13430	0.84	+1.1
3,036,249	+		PFLU_RS13430	0.84	+0.6
3,036,249	+		PFLU_RS13430	0.84	-0.9
3,036,249	+		PFLU_RS13430	0.84	-0.7
3,036,249	+		PFLU_RS13430	0.84	-0.1
3,036,249	+		PFLU_RS13430	0.84	-2.4
3,036,249	+		PFLU_RS13430	0.84	+0.4
3,036,249	+		PFLU_RS13430	0.84	-0.3
3,036,249	+		PFLU_RS13430	0.84	-0.4
3,036,249	+		PFLU_RS13430	0.84	+0.3
3,036,249	+		PFLU_RS13430	0.84	-0.7
3,036,249	+		PFLU_RS13430	0.84	-1.3
3,036,249	+		PFLU_RS13430	0.84	+0.2
3,036,249	+		PFLU_RS13430	0.84	-2.1
3,036,249	+		PFLU_RS13430	0.84	-0.3
3,036,249	+		PFLU_RS13430	0.84	-0.5
3,036,249	+		PFLU_RS13430	0.84	+0.4
3,036,250	-		PFLU_RS13430	0.84	+1.3
3,036,250	-		PFLU_RS13430	0.84	+1.0
3,036,250	-		PFLU_RS13430	0.84	-0.0
3,036,250	-		PFLU_RS13430	0.84	+1.6
3,036,250	-		PFLU_RS13430	0.84	-1.1
3,036,250	-		PFLU_RS13430	0.84	-0.3
3,036,250	-		PFLU_RS13430	0.84	+0.4
3,036,250	-		PFLU_RS13430	0.84	+0.9
3,036,250	-		PFLU_RS13430	0.84	-1.3
3,036,250	-		PFLU_RS13430	0.84	+0.6
3,036,250	-		PFLU_RS13430	0.84	+2.5
3,036,250	-		PFLU_RS13430	0.84	+0.8
3,036,250	-		PFLU_RS13430	0.84	+0.3
3,036,250	-		PFLU_RS13430	0.84	-0.0
3,036,250	-		PFLU_RS13430	0.84	+1.1
3,036,250	-		PFLU_RS13430	0.84	+0.6
3,036,250	-		PFLU_RS13430	0.84	+0.6
3,036,250	-		PFLU_RS13430	0.84	-2.2
3,036,250	-		PFLU_RS13430	0.84	-0.1
3,036,250	-		PFLU_RS13430	0.84	-1.9
3,036,250	-		PFLU_RS13430	0.84	+0.6
3,036,250	-		PFLU_RS13430	0.84	-0.1
3,036,250	-		PFLU_RS13430	0.84	-0.7
3,036,250	-		PFLU_RS13430	0.84	+1.1
3,036,270	+		PFLU_RS13430	0.85	+0.2
3,036,271	-		PFLU_RS13430	0.85	+0.9
3,036,271	-		PFLU_RS13430	0.85	+0.6
3,036,279	+		PFLU_RS13430	0.85	-0.9
3,036,279	+		PFLU_RS13430	0.85	+0.6
3,036,279	+		PFLU_RS13430	0.85	-1.7
3,036,279	+		PFLU_RS13430	0.85	+0.1
3,036,279	+		PFLU_RS13430	0.85	-0.8
3,036,279	+		PFLU_RS13430	0.85	-1.1
3,036,279	+		PFLU_RS13430	0.85	+1.1
3,036,279	+		PFLU_RS13430	0.85	+0.1
3,036,279	+		PFLU_RS13430	0.85	-1.4
3,036,279	+		PFLU_RS13430	0.85	+0.1
3,036,279	+		PFLU_RS13430	0.85	+0.7
3,036,279	+		PFLU_RS13430	0.85	-1.3
3,036,279	+		PFLU_RS13430	0.85	-0.7
3,036,279	+		PFLU_RS13430	0.85	+0.9
3,036,279	+		PFLU_RS13430	0.85	-0.1
3,036,279	+		PFLU_RS13430	0.85	+0.7
3,036,279	+		PFLU_RS13430	0.85	-0.6
3,036,279	+		PFLU_RS13430	0.85	+0.9
3,036,279	+		PFLU_RS13430	0.85	-1.4
3,036,279	+		PFLU_RS13430	0.85	+0.4
3,036,279	+		PFLU_RS13430	0.85	+0.4
3,036,279	+		PFLU_RS13430	0.85	+0.1
3,036,279	+		PFLU_RS13430	0.85	-0.3
3,036,279	+		PFLU_RS13430	0.85	-0.1
3,036,279	+		PFLU_RS13430	0.85	-2.4
3,036,279	+		PFLU_RS13430	0.85	+0.7
3,036,279	+		PFLU_RS13430	0.85	-1.4
3,036,279	+		PFLU_RS13430	0.85	+0.8
3,036,279	+		PFLU_RS13430	0.85	-0.1
3,036,279	+		PFLU_RS13430	0.85	-0.7
3,036,279	+		PFLU_RS13430	0.85	+0.5
3,036,279	+		PFLU_RS13430	0.85	+0.4
3,036,279	+		PFLU_RS13430	0.85	-0.1
3,036,280	-		PFLU_RS13430	0.85	+0.4
3,036,280	-		PFLU_RS13430	0.85	-2.4
3,036,280	-		PFLU_RS13430	0.85	-0.9
3,036,280	-		PFLU_RS13430	0.85	-0.4
3,036,280	-		PFLU_RS13430	0.85	-0.1
3,036,280	-		PFLU_RS13430	0.85	+0.6
3,036,280	-		PFLU_RS13430	0.85	-0.7
3,036,280	-		PFLU_RS13430	0.85	-0.2
3,036,280	-		PFLU_RS13430	0.85	-0.7
3,036,280	-		PFLU_RS13430	0.85	+0.9
3,036,280	-		PFLU_RS13430	0.85	+1.9
3,036,280	-		PFLU_RS13430	0.85	+0.1
3,036,280	-		PFLU_RS13430	0.85	+1.9
3,036,280	-		PFLU_RS13430	0.85	-0.4
3,036,280	-		PFLU_RS13430	0.85	-3.1
3,036,280	-		PFLU_RS13430	0.85	+1.5
3,036,280	-		PFLU_RS13430	0.85	+0.3
3,036,280	-		PFLU_RS13430	0.85	-0.3
3,036,280	-		PFLU_RS13430	0.85	+0.0
3,036,280	-		PFLU_RS13430	0.85	+0.1
3,036,280	-		PFLU_RS13430	0.85	+1.1
3,036,280	-		PFLU_RS13430	0.85	-0.7
3,036,280	-		PFLU_RS13430	0.85	-0.1
3,036,280	-		PFLU_RS13430	0.85	-0.9
3,036,280	-		PFLU_RS13430	0.85	+0.1
3,036,280	-		PFLU_RS13430	0.85	-1.1
3,036,281	+		PFLU_RS13430	0.85	-0.7
3,036,281	+		PFLU_RS13430	0.85	-0.1
3,036,281	+		PFLU_RS13430	0.85	+1.6
3,036,282	-		PFLU_RS13430	0.85	-1.1
3,036,489	+				-1.0
3,036,489	+				-1.0
3,036,489	+				-0.7
3,036,490	-				+1.3
3,036,490	-				+0.5
3,036,490	-				-1.4
3,036,634	+				-1.4
3,036,634	+				+0.3
3,036,635	-				-0.4
3,036,672	+				+0.3
3,036,672	+				-2.3
3,036,672	+				+0.0
3,036,672	+				-0.7
3,036,672	+				-0.1
3,036,673	-				-2.4
3,036,673	-				+0.2
3,036,673	-				-2.6
3,036,673	-				-0.2
3,036,673	-				+1.9
3,036,673	-				+0.7
3,036,673	-				-0.9
3,036,678	+				+1.6
3,036,678	+				-1.7
3,036,678	+				-2.1
3,036,679	-				-1.8
3,036,679	-				-1.6
3,036,679	-				+2.2
3,036,679	-				-0.3
3,036,679	-				-0.1
3,036,679	-				-1.4
3,036,679	-				-0.4
3,036,679	-				+0.1
3,036,922	+				+2.1
3,036,970	+				-0.1
3,036,970	+				-0.4
3,036,970	+				-0.3
3,036,971	-				-2.3
3,036,971	-				+0.1
3,037,124	+		PFLU_RS13435	0.12	-0.5
3,037,124	+		PFLU_RS13435	0.12	+0.9
3,037,124	+		PFLU_RS13435	0.12	-0.8
3,037,124	+		PFLU_RS13435	0.12	+1.1
3,037,124	+		PFLU_RS13435	0.12	-0.4
3,037,124	+		PFLU_RS13435	0.12	-0.9
3,037,124	+		PFLU_RS13435	0.12	+2.1
3,037,125	-		PFLU_RS13435	0.12	+0.8
3,037,125	-		PFLU_RS13435	0.12	+1.4
3,037,125	-		PFLU_RS13435	0.12	+0.9
3,037,203	-		PFLU_RS13435	0.15	-0.1
3,037,203	-		PFLU_RS13435	0.15	+2.0
3,037,254	+		PFLU_RS13435	0.17	+0.6
3,037,255	-		PFLU_RS13435	0.17	+0.1
3,037,350	+		PFLU_RS13435	0.20	-0.1
3,037,350	+		PFLU_RS13435	0.20	-1.7
3,037,350	+		PFLU_RS13435	0.20	+0.2
3,037,350	+		PFLU_RS13435	0.20	-0.4
3,037,350	+		PFLU_RS13435	0.20	-1.7
3,037,350	+		PFLU_RS13435	0.20	+0.9
3,037,350	+		PFLU_RS13435	0.20	+1.3
3,037,350	+		PFLU_RS13435	0.20	-0.7
3,037,350	+		PFLU_RS13435	0.20	-1.6
3,037,351	-		PFLU_RS13435	0.20	-1.0
3,037,351	-		PFLU_RS13435	0.20	+1.2
3,037,351	-		PFLU_RS13435	0.20	-0.0
3,037,351	-		PFLU_RS13435	0.20	+1.5
3,037,351	-		PFLU_RS13435	0.20	-0.7
3,037,351	-		PFLU_RS13435	0.20	+0.9
3,037,351	-		PFLU_RS13435	0.20	-1.4
3,037,351	-		PFLU_RS13435	0.20	-0.9
3,037,351	-		PFLU_RS13435	0.20	-1.1
3,037,351	-		PFLU_RS13435	0.20	+0.8
3,037,351	-		PFLU_RS13435	0.20	-0.1
3,037,351	-		PFLU_RS13435	0.20	-1.1
3,037,351	-		PFLU_RS13435	0.20	-0.9
3,037,351	-		PFLU_RS13435	0.20	+0.4
3,037,414	+		PFLU_RS13435	0.22	+1.2
3,037,414	+		PFLU_RS13435	0.22	-2.3
3,037,414	+		PFLU_RS13435	0.22	-1.1
3,037,461	-		PFLU_RS13435	0.23	-1.3
3,037,547	+		PFLU_RS13435	0.26	-1.7