Experiment: inner cut, R2A soft agar motility assay
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Ac3H11_2389 and Ac3H11_2390 are separated by 35 nucleotides Ac3H11_2390 and Ac3H11_2391 are separated by 26 nucleotides Ac3H11_2391 and Ac3H11_2392 are separated by 89 nucleotides
Ac3H11_2389 - hypothetical protein, at 648,098 to 648,568
_2389
Ac3H11_2390 - putative membrane protein, at 648,604 to 649,023
_2390
Ac3H11_2391 - L-asparaginase (EC 3.5.1.1), at 649,050 to 650,003
_2391
Ac3H11_2392 - SOS-response repressor and protease LexA (EC 3.4.21.88), at 650,093 to 650,779
_2392
Position (kb) 649
650
651 Strain fitness (log2 ratio) -2
-1
0
1
2
3
4 at 648.073 kb on + strand at 648.073 kb on + strand at 648.074 kb on - strand at 648.074 kb on - strand at 648.074 kb on - strand at 648.075 kb on + strand at 648.123 kb on + strand at 648.123 kb on + strand at 648.123 kb on + strand at 648.124 kb on - strand at 648.141 kb on + strand at 648.141 kb on + strand at 648.141 kb on + strand at 648.141 kb on + strand at 648.141 kb on + strand at 648.141 kb on + strand at 648.141 kb on + strand at 648.141 kb on + strand at 648.141 kb on + strand at 648.141 kb on + strand at 648.141 kb on + strand at 648.141 kb on + strand at 648.141 kb on + strand at 648.141 kb on + strand at 648.141 kb on + strand at 648.141 kb on + strand at 648.142 kb on - strand at 648.142 kb on - strand at 648.142 kb on - strand at 648.142 kb on - strand at 648.142 kb on - strand at 648.142 kb on - strand at 648.142 kb on - strand at 648.142 kb on - strand at 648.142 kb on - strand at 648.142 kb on - strand at 648.142 kb on - strand at 648.142 kb on - strand at 648.142 kb on - strand at 648.142 kb on - strand at 648.147 kb on + strand, within Ac3H11_2389 at 648.147 kb on + strand, within Ac3H11_2389 at 648.147 kb on + strand, within Ac3H11_2389 at 648.147 kb on + strand, within Ac3H11_2389 at 648.148 kb on - strand, within Ac3H11_2389 at 648.465 kb on + strand, within Ac3H11_2389 at 648.465 kb on + strand, within Ac3H11_2389 at 648.465 kb on + strand, within Ac3H11_2389 at 648.465 kb on + strand, within Ac3H11_2389 at 648.465 kb on + strand, within Ac3H11_2389 at 648.465 kb on + strand, within Ac3H11_2389 at 648.465 kb on + strand, within Ac3H11_2389 at 648.465 kb on + strand, within Ac3H11_2389 at 648.466 kb on - strand, within Ac3H11_2389 at 648.568 kb on + strand at 648.568 kb on + strand at 648.568 kb on + strand at 648.569 kb on - strand at 648.569 kb on - strand at 648.569 kb on - strand at 648.569 kb on - strand at 648.569 kb on - strand at 648.606 kb on - strand at 648.606 kb on - strand at 648.611 kb on + strand at 648.612 kb on - strand at 648.612 kb on - strand at 648.989 kb on + strand at 649.023 kb on + strand at 649.023 kb on + strand at 649.023 kb on + strand at 649.023 kb on + strand at 649.023 kb on + strand at 649.023 kb on + strand at 649.023 kb on + strand at 649.023 kb on + strand at 649.023 kb on + strand at 649.023 kb on + strand at 649.023 kb on + strand at 649.023 kb on + strand at 649.023 kb on + strand at 649.023 kb on + strand at 649.024 kb on - strand at 649.024 kb on - strand at 649.024 kb on - strand at 649.024 kb on - strand at 649.024 kb on - strand at 649.024 kb on - strand at 649.024 kb on - strand at 649.024 kb on - strand at 649.024 kb on - strand at 649.024 kb on - strand at 649.024 kb on - strand at 649.024 kb on - strand at 649.029 kb on + strand at 649.029 kb on + strand at 649.029 kb on + strand at 649.029 kb on + strand at 649.029 kb on + strand at 649.029 kb on + strand at 649.029 kb on + strand at 649.029 kb on + strand at 649.029 kb on + strand at 649.029 kb on + strand at 649.030 kb on - strand at 649.030 kb on - strand at 649.030 kb on - strand at 649.030 kb on - strand at 649.030 kb on - strand at 649.030 kb on - strand at 649.030 kb on - strand at 649.030 kb on - strand at 649.030 kb on - strand at 649.030 kb on - strand at 649.033 kb on + strand at 649.033 kb on + strand at 649.033 kb on + strand at 649.034 kb on - strand at 649.034 kb on - strand at 649.377 kb on - strand, within Ac3H11_2391 at 649.382 kb on + strand, within Ac3H11_2391 at 649.899 kb on + strand, within Ac3H11_2391 at 649.899 kb on + strand, within Ac3H11_2391 at 649.899 kb on + strand, within Ac3H11_2391 at 649.899 kb on + strand, within Ac3H11_2391 at 649.900 kb on - strand, within Ac3H11_2391 at 649.900 kb on - strand, within Ac3H11_2391 at 649.921 kb on + strand at 649.922 kb on - strand at 649.953 kb on - strand at 650.009 kb on + strand at 650.010 kb on - strand at 650.010 kb on - strand at 650.069 kb on + strand at 650.341 kb on + strand, within Ac3H11_2392 at 650.341 kb on + strand, within Ac3H11_2392 at 650.465 kb on + strand, within Ac3H11_2392 at 650.465 kb on + strand, within Ac3H11_2392 at 650.465 kb on + strand, within Ac3H11_2392 at 650.465 kb on + strand, within Ac3H11_2392 at 650.465 kb on + strand, within Ac3H11_2392 at 650.465 kb on + strand, within Ac3H11_2392 at 650.465 kb on + strand, within Ac3H11_2392 at 650.465 kb on + strand, within Ac3H11_2392 at 650.465 kb on + strand, within Ac3H11_2392 at 650.465 kb on + strand, within Ac3H11_2392 at 650.465 kb on + strand, within Ac3H11_2392 at 650.465 kb on + strand, within Ac3H11_2392 at 650.465 kb on + strand, within Ac3H11_2392 at 650.465 kb on + strand, within Ac3H11_2392 at 650.465 kb on + strand, within Ac3H11_2392 at 650.465 kb on + strand, within Ac3H11_2392 at 650.465 kb on + strand, within Ac3H11_2392 at 650.465 kb on + strand, within Ac3H11_2392 at 650.466 kb on - strand, within Ac3H11_2392 at 650.466 kb on - strand, within Ac3H11_2392 at 650.466 kb on - strand, within Ac3H11_2392 at 650.466 kb on - strand, within Ac3H11_2392 at 650.466 kb on - strand, within Ac3H11_2392 at 650.504 kb on + strand, within Ac3H11_2392 at 650.504 kb on + strand, within Ac3H11_2392 at 650.504 kb on + strand, within Ac3H11_2392 at 650.505 kb on - strand, within Ac3H11_2392 at 650.777 kb on + strand at 650.777 kb on + strand at 650.777 kb on + strand at 650.777 kb on + strand at 650.777 kb on + strand at 650.777 kb on + strand at 650.778 kb on - strand at 650.778 kb on - strand at 650.778 kb on - strand at 650.778 kb on - strand at 650.830 kb on + strand at 650.831 kb on - strand at 650.831 kb on - strand at 650.831 kb on - strand at 650.880 kb on - strand at 650.880 kb on - strand at 651.000 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction inner cut, R2A soft agar motility assay remove 648,073 + -0.3 648,073 + -0.5 648,074 - -0.9 648,074 - -0.9 648,074 - +1.5 648,075 + +4.0 648,123 + +0.8 648,123 + +1.0 648,123 + -0.3 648,124 - +0.2 648,141 + -1.4 648,141 + +0.1 648,141 + -1.3 648,141 + -0.2 648,141 + -0.6 648,141 + +0.9 648,141 + -2.3 648,141 + -0.6 648,141 + -0.8 648,141 + -0.3 648,141 + -0.6 648,141 + +0.7 648,141 + -0.2 648,141 + -0.2 648,141 + +0.1 648,141 + -0.8 648,142 - -1.9 648,142 - +0.4 648,142 - -0.1 648,142 - +0.9 648,142 - -1.0 648,142 - -0.1 648,142 - +0.6 648,142 - +0.4 648,142 - -0.6 648,142 - -2.6 648,142 - -1.1 648,142 - +0.9 648,142 - -0.8 648,142 - +2.4 648,147 + Ac3H11_2389 0.10 +0.5 648,147 + Ac3H11_2389 0.10 +0.8 648,147 + Ac3H11_2389 0.10 -1.1 648,147 + Ac3H11_2389 0.10 +0.4 648,148 - Ac3H11_2389 0.11 -0.6 648,465 + Ac3H11_2389 0.78 +3.0 648,465 + Ac3H11_2389 0.78 +0.0 648,465 + Ac3H11_2389 0.78 +0.7 648,465 + Ac3H11_2389 0.78 -0.2 648,465 + Ac3H11_2389 0.78 -2.1 648,465 + Ac3H11_2389 0.78 +0.4 648,465 + Ac3H11_2389 0.78 +1.6 648,465 + Ac3H11_2389 0.78 +0.7 648,466 - Ac3H11_2389 0.78 -1.0 648,568 + -0.3 648,568 + +2.3 648,568 + +1.2 648,569 - -1.1 648,569 - +0.1 648,569 - -2.6 648,569 - -0.7 648,569 - -1.3 648,606 - -0.3 648,606 - +0.7 648,611 + +0.0 648,612 - -2.1 648,612 - +0.7 648,989 + -0.9 649,023 + +0.2 649,023 + -2.1 649,023 + -0.5 649,023 + +0.7 649,023 + -1.0 649,023 + +2.4 649,023 + -0.5 649,023 + +1.4 649,023 + -0.5 649,023 + -1.5 649,023 + -0.6 649,023 + -0.5 649,023 + -0.1 649,023 + +0.5 649,024 - +0.3 649,024 - +1.4 649,024 - +0.6 649,024 - -1.1 649,024 - -0.0 649,024 - -0.5 649,024 - -1.5 649,024 - -1.6 649,024 - -2.0 649,024 - -0.2 649,024 - +0.0 649,024 - -0.4 649,029 + +0.8 649,029 + -1.9 649,029 + +0.7 649,029 + -0.5 649,029 + -1.1 649,029 + +2.2 649,029 + +0.9 649,029 + +2.2 649,029 + -1.0 649,029 + -0.4 649,030 - +3.1 649,030 - -0.1 649,030 - -0.2 649,030 - +1.9 649,030 - +0.9 649,030 - -0.7 649,030 - +0.2 649,030 - +0.8 649,030 - -1.3 649,030 - -0.5 649,033 + +0.0 649,033 + +0.1 649,033 + +0.1 649,034 - +2.1 649,034 - -2.1 649,377 - Ac3H11_2391 0.34 -0.4 649,382 + Ac3H11_2391 0.35 -0.8 649,899 + Ac3H11_2391 0.89 +0.9 649,899 + Ac3H11_2391 0.89 -0.8 649,899 + Ac3H11_2391 0.89 +0.2 649,899 + Ac3H11_2391 0.89 +0.8 649,900 - Ac3H11_2391 0.89 +0.9 649,900 - Ac3H11_2391 0.89 +1.2 649,921 + -1.5 649,922 - -0.7 649,953 - +0.4 650,009 + -1.1 650,010 - -1.9 650,010 - -1.2 650,069 + -1.6 650,341 + Ac3H11_2392 0.36 +0.7 650,341 + Ac3H11_2392 0.36 -0.1 650,465 + Ac3H11_2392 0.54 -1.6 650,465 + Ac3H11_2392 0.54 +0.3 650,465 + Ac3H11_2392 0.54 -0.3 650,465 + Ac3H11_2392 0.54 -0.3 650,465 + Ac3H11_2392 0.54 +0.0 650,465 + Ac3H11_2392 0.54 -1.2 650,465 + Ac3H11_2392 0.54 +0.4 650,465 + Ac3H11_2392 0.54 -1.5 650,465 + Ac3H11_2392 0.54 +0.8 650,465 + Ac3H11_2392 0.54 +0.2 650,465 + Ac3H11_2392 0.54 -0.2 650,465 + Ac3H11_2392 0.54 +0.7 650,465 + Ac3H11_2392 0.54 +0.9 650,465 + Ac3H11_2392 0.54 -0.5 650,465 + Ac3H11_2392 0.54 -0.0 650,465 + Ac3H11_2392 0.54 -1.8 650,465 + Ac3H11_2392 0.54 +0.0 650,465 + Ac3H11_2392 0.54 -0.5 650,466 - Ac3H11_2392 0.54 -0.1 650,466 - Ac3H11_2392 0.54 +0.3 650,466 - Ac3H11_2392 0.54 -0.6 650,466 - Ac3H11_2392 0.54 +1.8 650,466 - Ac3H11_2392 0.54 +0.0 650,504 + Ac3H11_2392 0.60 -0.0 650,504 + Ac3H11_2392 0.60 +0.9 650,504 + Ac3H11_2392 0.60 -0.8 650,505 - Ac3H11_2392 0.60 -1.4 650,777 + +0.9 650,777 + -0.1 650,777 + -0.9 650,777 + -0.9 650,777 + -1.0 650,777 + -1.4 650,778 - -2.5 650,778 - +0.9 650,778 - +0.2 650,778 - +0.2 650,830 + -0.7 650,831 - +0.2 650,831 - +1.1 650,831 - -0.6 650,880 - +0.4 650,880 - -0.3 651,000 - +1.9
Or see this region's nucleotide sequence