Experiment: D-Cycloserine 0.1 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO353_25830 and AO353_25835 overlap by 4 nucleotides AO353_25835 and AO353_25840 are separated by 616 nucleotides
AO353_25830: AO353_25830 - glucose-6-phosphate dehydrogenase, at 5,693,505 to 5,695,019
_25830
AO353_25835: AO353_25835 - 6-phosphogluconate dehydrogenase, at 5,695,016 to 5,695,996
_25835
AO353_25840: AO353_25840 - hypothetical protein, at 5,696,613 to 5,698,358
_25840
Position (kb) 5695
5696 Strain fitness (log2 ratio) -2
-1
0
1
2
3 at 5694.109 kb on + strand, within AO353_25830 at 5694.109 kb on + strand, within AO353_25830 at 5694.109 kb on + strand, within AO353_25830 at 5694.109 kb on + strand, within AO353_25830 at 5694.109 kb on + strand, within AO353_25830 at 5694.109 kb on + strand, within AO353_25830 at 5694.110 kb on - strand, within AO353_25830 at 5694.110 kb on - strand, within AO353_25830 at 5694.110 kb on - strand, within AO353_25830 at 5694.261 kb on - strand, within AO353_25830 at 5694.261 kb on - strand, within AO353_25830 at 5694.261 kb on - strand, within AO353_25830 at 5694.345 kb on + strand, within AO353_25830 at 5694.346 kb on - strand, within AO353_25830 at 5694.346 kb on - strand, within AO353_25830 at 5694.346 kb on - strand, within AO353_25830 at 5694.346 kb on - strand, within AO353_25830 at 5694.346 kb on - strand, within AO353_25830 at 5694.358 kb on + strand, within AO353_25830 at 5694.358 kb on + strand, within AO353_25830 at 5694.358 kb on + strand, within AO353_25830 at 5694.358 kb on + strand, within AO353_25830 at 5694.358 kb on + strand, within AO353_25830 at 5694.358 kb on + strand, within AO353_25830 at 5694.358 kb on + strand at 5694.358 kb on + strand, within AO353_25830 at 5694.359 kb on - strand, within AO353_25830 at 5694.359 kb on - strand, within AO353_25830 at 5694.359 kb on - strand, within AO353_25830 at 5694.359 kb on - strand, within AO353_25830 at 5694.359 kb on - strand, within AO353_25830 at 5694.359 kb on - strand, within AO353_25830 at 5694.359 kb on - strand, within AO353_25830 at 5694.359 kb on - strand, within AO353_25830 at 5694.359 kb on - strand, within AO353_25830 at 5694.359 kb on - strand, within AO353_25830 at 5694.439 kb on + strand, within AO353_25830 at 5694.440 kb on - strand, within AO353_25830 at 5694.637 kb on + strand, within AO353_25830 at 5694.637 kb on + strand, within AO353_25830 at 5694.637 kb on + strand, within AO353_25830 at 5694.638 kb on - strand, within AO353_25830 at 5694.638 kb on - strand, within AO353_25830 at 5694.638 kb on - strand, within AO353_25830 at 5694.638 kb on - strand, within AO353_25830 at 5694.656 kb on + strand, within AO353_25830 at 5694.691 kb on + strand, within AO353_25830 at 5694.692 kb on - strand, within AO353_25830 at 5694.692 kb on - strand, within AO353_25830 at 5694.724 kb on + strand, within AO353_25830 at 5694.724 kb on + strand, within AO353_25830 at 5694.724 kb on + strand, within AO353_25830 at 5694.724 kb on + strand, within AO353_25830 at 5694.725 kb on - strand, within AO353_25830 at 5694.725 kb on - strand, within AO353_25830 at 5694.725 kb on - strand, within AO353_25830 at 5694.725 kb on - strand, within AO353_25830 at 5694.725 kb on - strand, within AO353_25830 at 5694.725 kb on - strand, within AO353_25830 at 5694.725 kb on - strand, within AO353_25830 at 5694.910 kb on + strand at 5694.910 kb on + strand at 5694.910 kb on + strand at 5694.910 kb on + strand at 5694.911 kb on - strand at 5694.911 kb on - strand at 5694.974 kb on + strand at 5694.974 kb on + strand at 5694.974 kb on + strand at 5694.975 kb on - strand at 5694.975 kb on - strand at 5694.975 kb on - strand at 5695.010 kb on + strand at 5695.010 kb on + strand at 5695.011 kb on - strand at 5695.083 kb on + strand at 5695.083 kb on + strand at 5695.084 kb on - strand at 5695.087 kb on + strand at 5695.088 kb on - strand at 5695.088 kb on - strand at 5695.088 kb on - strand at 5695.088 kb on - strand at 5695.088 kb on - strand at 5695.088 kb on - strand at 5695.088 kb on - strand at 5695.088 kb on - strand at 5695.088 kb on - strand at 5695.088 kb on - strand at 5695.470 kb on + strand, within AO353_25835 at 5695.470 kb on + strand, within AO353_25835 at 5695.654 kb on - strand, within AO353_25835 at 5695.654 kb on - strand, within AO353_25835 at 5695.702 kb on + strand, within AO353_25835 at 5695.703 kb on - strand, within AO353_25835 at 5695.704 kb on + strand, within AO353_25835 at 5695.704 kb on + strand, within AO353_25835 at 5695.704 kb on + strand, within AO353_25835 at 5695.704 kb on + strand, within AO353_25835 at 5695.704 kb on + strand, within AO353_25835 at 5695.704 kb on + strand, within AO353_25835 at 5695.704 kb on + strand at 5695.704 kb on + strand, within AO353_25835 at 5695.704 kb on + strand, within AO353_25835 at 5695.704 kb on + strand, within AO353_25835 at 5695.705 kb on - strand, within AO353_25835 at 5695.705 kb on - strand, within AO353_25835 at 5695.705 kb on - strand, within AO353_25835 at 5695.705 kb on - strand, within AO353_25835 at 5695.911 kb on + strand at 5695.912 kb on - strand at 5695.912 kb on - strand at 5695.912 kb on - strand at 5695.912 kb on - strand at 5696.011 kb on + strand at 5696.011 kb on + strand at 5696.012 kb on - strand at 5696.012 kb on - strand at 5696.012 kb on - strand at 5696.014 kb on + strand at 5696.014 kb on + strand at 5696.020 kb on + strand at 5696.020 kb on + strand at 5696.020 kb on + strand at 5696.021 kb on - strand at 5696.021 kb on - strand at 5696.021 kb on - strand at 5696.021 kb on - strand at 5696.021 kb on - strand at 5696.040 kb on + strand at 5696.041 kb on - strand at 5696.064 kb on + strand at 5696.084 kb on + strand at 5696.084 kb on + strand at 5696.084 kb on + strand at 5696.084 kb on + strand at 5696.085 kb on - strand at 5696.085 kb on - strand at 5696.085 kb on - strand at 5696.085 kb on - strand at 5696.085 kb on - strand at 5696.085 kb on - strand at 5696.085 kb on - strand at 5696.109 kb on + strand at 5696.109 kb on + strand at 5696.109 kb on + strand at 5696.110 kb on - strand at 5696.112 kb on - strand at 5696.112 kb on - strand at 5696.176 kb on + strand at 5696.176 kb on + strand at 5696.282 kb on + strand at 5696.283 kb on - strand at 5696.285 kb on + strand at 5696.286 kb on - strand at 5696.311 kb on + strand at 5696.312 kb on - strand at 5696.312 kb on - strand at 5696.319 kb on + strand at 5696.320 kb on - strand at 5696.458 kb on - strand at 5696.473 kb on + strand at 5696.515 kb on + strand at 5696.515 kb on + strand at 5696.515 kb on + strand at 5696.516 kb on - strand at 5696.516 kb on - strand at 5696.528 kb on - strand at 5696.530 kb on - strand at 5696.591 kb on - strand at 5696.591 kb on - strand at 5696.591 kb on - strand at 5696.594 kb on + strand at 5696.594 kb on + strand at 5696.625 kb on - strand at 5696.625 kb on - strand at 5696.636 kb on + strand at 5696.637 kb on - strand at 5696.637 kb on - strand at 5696.637 kb on - strand at 5696.768 kb on + strand at 5696.769 kb on - strand at 5696.800 kb on + strand, within AO353_25840 at 5696.801 kb on - strand, within AO353_25840 at 5696.881 kb on - strand, within AO353_25840 at 5696.888 kb on + strand, within AO353_25840 at 5696.888 kb on + strand, within AO353_25840 at 5696.889 kb on - strand, within AO353_25840 at 5696.889 kb on - strand, within AO353_25840 at 5696.889 kb on - strand, within AO353_25840 at 5696.889 kb on - strand, within AO353_25840 at 5696.892 kb on + strand, within AO353_25840 at 5696.892 kb on + strand, within AO353_25840 at 5696.892 kb on + strand, within AO353_25840 at 5696.892 kb on + strand, within AO353_25840 at 5696.892 kb on + strand, within AO353_25840 at 5696.892 kb on + strand, within AO353_25840 at 5696.892 kb on + strand, within AO353_25840 at 5696.893 kb on - strand, within AO353_25840 at 5696.893 kb on - strand, within AO353_25840 at 5696.893 kb on - strand, within AO353_25840 at 5696.893 kb on - strand, within AO353_25840 at 5696.893 kb on - strand, within AO353_25840 at 5696.893 kb on - strand, within AO353_25840 at 5696.961 kb on + strand, within AO353_25840 at 5696.961 kb on + strand at 5696.961 kb on + strand, within AO353_25840 at 5696.962 kb on - strand at 5696.962 kb on - strand, within AO353_25840 at 5696.962 kb on - strand, within AO353_25840 at 5696.974 kb on - strand, within AO353_25840 at 5696.974 kb on - strand, within AO353_25840
Per-strain Table
Position Strand Gene LocusTag Fraction D-Cycloserine 0.1 mg/ml remove 5,694,109 + AO353_25830 0.40 +0.6 5,694,109 + AO353_25830 0.40 -0.1 5,694,109 + AO353_25830 0.40 +0.5 5,694,109 + AO353_25830 0.40 -2.2 5,694,109 + AO353_25830 0.40 +0.4 5,694,109 + AO353_25830 0.40 +1.8 5,694,110 - AO353_25830 0.40 -0.0 5,694,110 - AO353_25830 0.40 +1.2 5,694,110 - AO353_25830 0.40 -0.8 5,694,261 - AO353_25830 0.50 -2.1 5,694,261 - AO353_25830 0.50 -0.3 5,694,261 - AO353_25830 0.50 +0.9 5,694,345 + AO353_25830 0.55 -0.5 5,694,346 - AO353_25830 0.56 -0.1 5,694,346 - AO353_25830 0.56 -0.1 5,694,346 - AO353_25830 0.56 +0.0 5,694,346 - AO353_25830 0.56 +1.0 5,694,346 - AO353_25830 0.56 -0.4 5,694,358 + AO353_25830 0.56 +0.9 5,694,358 + AO353_25830 0.56 -0.8 5,694,358 + AO353_25830 0.56 -0.5 5,694,358 + AO353_25830 0.56 +0.4 5,694,358 + AO353_25830 0.56 -0.5 5,694,358 + AO353_25830 0.56 -1.0 5,694,358 + -1.4 5,694,358 + AO353_25830 0.56 +0.4 5,694,359 - AO353_25830 0.56 -0.4 5,694,359 - AO353_25830 0.56 +1.2 5,694,359 - AO353_25830 0.56 +0.4 5,694,359 - AO353_25830 0.56 -0.9 5,694,359 - AO353_25830 0.56 +0.7 5,694,359 - AO353_25830 0.56 -0.3 5,694,359 - AO353_25830 0.56 +0.3 5,694,359 - AO353_25830 0.56 -0.1 5,694,359 - AO353_25830 0.56 -0.4 5,694,359 - AO353_25830 0.56 -0.2 5,694,439 + AO353_25830 0.62 -0.2 5,694,440 - AO353_25830 0.62 -0.9 5,694,637 + AO353_25830 0.75 -0.3 5,694,637 + AO353_25830 0.75 +0.6 5,694,637 + AO353_25830 0.75 -0.9 5,694,638 - AO353_25830 0.75 -1.3 5,694,638 - AO353_25830 0.75 +0.1 5,694,638 - AO353_25830 0.75 +0.0 5,694,638 - AO353_25830 0.75 -0.9 5,694,656 + AO353_25830 0.76 -0.2 5,694,691 + AO353_25830 0.78 -1.0 5,694,692 - AO353_25830 0.78 -0.1 5,694,692 - AO353_25830 0.78 -1.4 5,694,724 + AO353_25830 0.80 -0.8 5,694,724 + AO353_25830 0.80 +0.3 5,694,724 + AO353_25830 0.80 +0.9 5,694,724 + AO353_25830 0.80 -1.0 5,694,725 - AO353_25830 0.81 -0.5 5,694,725 - AO353_25830 0.81 +0.2 5,694,725 - AO353_25830 0.81 -1.4 5,694,725 - AO353_25830 0.81 +0.5 5,694,725 - AO353_25830 0.81 -1.1 5,694,725 - AO353_25830 0.81 +0.0 5,694,725 - AO353_25830 0.81 +0.6 5,694,910 + -1.1 5,694,910 + -0.4 5,694,910 + +0.5 5,694,910 + +0.2 5,694,911 - +0.6 5,694,911 - +1.5 5,694,974 + +0.9 5,694,974 + -1.0 5,694,974 + +1.6 5,694,975 - -2.0 5,694,975 - -0.8 5,694,975 - +1.2 5,695,010 + +0.3 5,695,010 + -1.1 5,695,011 - -0.0 5,695,083 + +1.9 5,695,083 + +0.2 5,695,084 - -1.4 5,695,087 + +1.2 5,695,088 - +0.5 5,695,088 - -2.1 5,695,088 - +0.2 5,695,088 - -1.1 5,695,088 - +0.7 5,695,088 - +0.6 5,695,088 - -0.4 5,695,088 - -1.4 5,695,088 - +0.9 5,695,088 - -0.4 5,695,470 + AO353_25835 0.46 -0.8 5,695,470 + AO353_25835 0.46 -0.2 5,695,654 - AO353_25835 0.65 -1.4 5,695,654 - AO353_25835 0.65 -0.4 5,695,702 + AO353_25835 0.70 +0.1 5,695,703 - AO353_25835 0.70 +0.5 5,695,704 + AO353_25835 0.70 -0.1 5,695,704 + AO353_25835 0.70 -1.3 5,695,704 + AO353_25835 0.70 -0.4 5,695,704 + AO353_25835 0.70 -0.8 5,695,704 + AO353_25835 0.70 -2.4 5,695,704 + AO353_25835 0.70 -1.5 5,695,704 + +0.2 5,695,704 + AO353_25835 0.70 -0.5 5,695,704 + AO353_25835 0.70 +0.9 5,695,704 + AO353_25835 0.70 -1.1 5,695,705 - AO353_25835 0.70 -1.3 5,695,705 - AO353_25835 0.70 -0.6 5,695,705 - AO353_25835 0.70 -2.6 5,695,705 - AO353_25835 0.70 +0.2 5,695,911 + +1.2 5,695,912 - -0.4 5,695,912 - -0.3 5,695,912 - +0.2 5,695,912 - -0.4 5,696,011 + -0.7 5,696,011 + -0.8 5,696,012 - +0.6 5,696,012 - +0.5 5,696,012 - -1.8 5,696,014 + -0.7 5,696,014 + -1.1 5,696,020 + -1.6 5,696,020 + +2.2 5,696,020 + +1.9 5,696,021 - -0.0 5,696,021 - -0.1 5,696,021 - -1.8 5,696,021 - +0.5 5,696,021 - +0.2 5,696,040 + -0.9 5,696,041 - +0.8 5,696,064 + +0.7 5,696,084 + -0.8 5,696,084 + -0.4 5,696,084 + -0.4 5,696,084 + +1.2 5,696,085 - +1.2 5,696,085 - +0.5 5,696,085 - -0.3 5,696,085 - -0.1 5,696,085 - +0.8 5,696,085 - +0.5 5,696,085 - -1.3 5,696,109 + -0.8 5,696,109 + -0.7 5,696,109 + -0.8 5,696,110 - -0.9 5,696,112 - +0.4 5,696,112 - +0.9 5,696,176 + +0.2 5,696,176 + -0.4 5,696,282 + +0.9 5,696,283 - -0.3 5,696,285 + -0.2 5,696,286 - +0.2 5,696,311 + -0.7 5,696,312 - -0.7 5,696,312 - -1.6 5,696,319 + +1.2 5,696,320 - +0.2 5,696,458 - +0.6 5,696,473 + +0.1 5,696,515 + -0.7 5,696,515 + -1.1 5,696,515 + +0.2 5,696,516 - +0.1 5,696,516 - -1.0 5,696,528 - +0.3 5,696,530 - -1.1 5,696,591 - -0.8 5,696,591 - -1.6 5,696,591 - -2.3 5,696,594 + -1.4 5,696,594 + -0.8 5,696,625 - -0.9 5,696,625 - -2.1 5,696,636 + +1.0 5,696,637 - +0.7 5,696,637 - -0.8 5,696,637 - +1.6 5,696,768 + +0.5 5,696,769 - -1.7 5,696,800 + AO353_25840 0.11 +0.5 5,696,801 - AO353_25840 0.11 +1.6 5,696,881 - AO353_25840 0.15 -0.1 5,696,888 + AO353_25840 0.16 +1.2 5,696,888 + AO353_25840 0.16 -1.5 5,696,889 - AO353_25840 0.16 -0.8 5,696,889 - AO353_25840 0.16 +0.5 5,696,889 - AO353_25840 0.16 -0.5 5,696,889 - AO353_25840 0.16 +0.8 5,696,892 + AO353_25840 0.16 -0.9 5,696,892 + AO353_25840 0.16 -0.4 5,696,892 + AO353_25840 0.16 +1.0 5,696,892 + AO353_25840 0.16 -0.1 5,696,892 + AO353_25840 0.16 -2.3 5,696,892 + AO353_25840 0.16 +0.6 5,696,892 + AO353_25840 0.16 -2.4 5,696,893 - AO353_25840 0.16 +0.2 5,696,893 - AO353_25840 0.16 -2.3 5,696,893 - AO353_25840 0.16 +0.5 5,696,893 - AO353_25840 0.16 +0.7 5,696,893 - AO353_25840 0.16 -1.3 5,696,893 - AO353_25840 0.16 -0.4 5,696,961 + AO353_25840 0.20 +0.4 5,696,961 + +1.5 5,696,961 + AO353_25840 0.20 -2.5 5,696,962 - +2.8 5,696,962 - AO353_25840 0.20 +0.3 5,696,962 - AO353_25840 0.20 -0.3 5,696,974 - AO353_25840 0.21 +0.5 5,696,974 - AO353_25840 0.21 -0.4
Or see this region's nucleotide sequence